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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3626

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3626_1
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(311..1033)
DNA (723bp) protein (241aa)
Transcriptional regulator, GntR family n=4 Tax=Pseudomonas RepID=I2BX54_PSEFL
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EIK61444.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Ps
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3626_2
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1082..2818)
DNA (1737bp) protein (579aa)
dihydroxy-acid dehydratase (EC:4.2.1.9) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
dihydroxy-acid dehydratase (EC:4.2.1.9) rbh
Dihydroxy-acid dehydratase n=2 Tax=Pseudomonas RepID=S6HAJ6_9PSED
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3626_3
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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3010..4332
DNA (1323bp) protein (441aa)
Transporter, major facilitator family n=3 Tax=Pseudomonas RepID=I2BN25_PSEFL
major facilitator family transporter Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
major facilitator family transporter rbh
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3626_4
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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4349..5341
DNA (993bp) protein (331aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BQE3_PSEFL
hypothetical protein rbh
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3626_5
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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5352..6932
DNA (1581bp) protein (527aa)
aldH_1; NADP-dependent fatty aldehyde dehydrogenase (EC:1.2.1.4) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
aldH_1; NADP-dependent fatty aldehyde dehydrogenase (EC:1.2.1.4)
Putative aldehyde dehydrogenase n=1 Tax=Pseudomonas sp. CF150 RepID=S6KE17_9PSED
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3626_6
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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6949..7812
DNA (864bp) protein (288aa)
SMP-30/Gluconolaconase/LRE family protein n=2 Tax=Pseudomonas RepID=I2BXV2_PSEFL
SMP-30/Gluconolaconase/LRE family protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
SMP-30/Gluconolaconase/LRE family protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3626_7
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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7984..8988
DNA (1005bp) protein (335aa)
L-arabinose ABC transporter, periplasmic L-arabinose-binding protein AraF n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4K3P4_PSEFL
arabinose ABC transporter L-arabinose-binding periplasmic protein AraF Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
arabinose ABC transporter L-arabinose-binding periplasmic protein AraF
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3626_8
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8985..9278
DNA (294bp) protein (98aa)
araG_1; L-arabinose ABC transporter, ATP-binding protein AraG (EC:3.6.3.17)
Arabinose import ATP-binding protein AraG {ECO:0000256|HAMAP-Rule:MF_01721}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01721};; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseud
L-arabinose ABC transporter, ATP-binding protein AraG n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4K8S5_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3626_9
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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9331..11364
DNA (2034bp) protein (678aa)
araG_1; L-arabinose ABC transporter, ATP-binding protein AraG (EC:3.6.3.17) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
araG_1; L-arabinose ABC transporter, ATP-binding protein AraG (EC:3.6.3.17)
L-arabinose transporter ATP-binding protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6IMU5_9PSED
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3626_10
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11480..12628)
DNA (1149bp) protein (383aa)
Aldose 1-epimerase n=1 Tax=Pseudomonas sp. CF150 RepID=S6KBZ5_9PSED
aldose 1-epimerase family protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
aldose 1-epimerase family protein rbh
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3626_11
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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12767..13534
DNA (768bp) protein (256aa)
Short chain dehydrogenase/reductase family protein n=2 Tax=Pseudomonas RepID=I2BTL0_PSEFL
short chain dehydrogenase/reductase family protein rbh
short chain dehydrogenase/reductase family protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3626_12
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13608..14204)
DNA (597bp) protein (199aa)
Putative glutathione S-transferase n=1 Tax=Pseudomonas sp. CF150 RepID=S6IUX4_9PSED
glutathione S-transferase domain protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
glutathione S-transferase domain protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3626_13
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14235..14768)
DNA (534bp) protein (178aa)
mug; G/U mismatch-specific DNA glycosylase (EC:3.2.2.-) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
mug; G/U mismatch-specific DNA glycosylase (EC:3.2.2.-)
G/U mismatch-specific DNA glycosylase n=3 Tax=Pseudomonas RepID=I2BXQ0_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3626_14
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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14864..15694
DNA (831bp) protein (277aa)
Putative glutathione S-transferase n=1 Tax=Pseudomonas sp. CF150 RepID=S6IQM2_9PSED
glutathione S-transferase family protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
glutathione S-transferase family protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3626_15
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15817..16743)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KBZ8_9PSED
rhizopine ABC transporter, periplasmic rhizopine-binding protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
rhizopine ABC transporter, periplasmic rhizopine-binding protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3626_16
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16763..17542)
DNA (780bp) protein (260aa)
Hydroxypyruvate isomerase n=2 Tax=Pseudomonas RepID=I2BTP2_PSEFL
AP endonuclease, family 2 Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
AP endonuclease, family 2
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3626_17
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17542..18558)
DNA (1017bp) protein (339aa)
Putative oxidoreductase n=2 Tax=Pseudomonas RepID=S6IUX8_9PSED
oxidoreductase, NAD-binding, Gfo/Idh/MocA family Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
oxidoreductase, NAD-binding, Gfo/Idh/MocA family
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3626_18
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18746..20707
DNA (1962bp) protein (654aa)
Sigma-54 dependent transcriptional regulator, Fis family n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BQX7_PSEFL
sigma-54 dependent transcriptional regulator, Fis family Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
sigma-54 dependent transcriptional regulator, Fis family rbh
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3626_19
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20726..21775)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BP76_PSEFL
hypothetical protein
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3626_20
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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21937..23019
DNA (1083bp) protein (361aa)
Putative desaturase n=1 Tax=Pseudomonas sp. CF150 RepID=S6KC01_9PSED
fatty acid desaturase Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
fatty acid desaturase
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3626_21
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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23124..23450
DNA (327bp) protein (109aa)
Putative dioxygenase system ferredoxin component n=2 Tax=Pseudomonas RepID=S6IP73_9PSED
Rieske [2Fe-2S] domain protein, MocE subfamily Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
Rieske [2Fe-2S] domain protein, MocE subfamily
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3626_22
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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23447..24646
DNA (1200bp) protein (400aa)
Putative dioxygenase system reductase component n=1 Tax=Pseudomonas sp. CF150 RepID=S6IUY3_9PSED
pyridine nucleotide-disulfide oxidoreductase Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
pyridine nucleotide-disulfide oxidoreductase rbh
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3626_23
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24649..25467
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6IMV9_9PSED
AP endonuclease, family 2 Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
AP endonuclease, family 2 rbh
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3626_24
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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25516..26478
DNA (963bp) protein (321aa)
Dyp-type peroxidase n=2 Tax=Pseudomonas RepID=S6HA81_9PSED
Dyp-type peroxidase family protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
Dyp-type peroxidase family protein rbh
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3626_25
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26475..27347)
DNA (873bp) protein (291aa)
uppP_1; undecaprenyl-diphosphatase UppP (EC:3.6.1.27) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
uppP_1; undecaprenyl-diphosphatase UppP (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=3 Tax=Pseudomonas RepID=I2BPT4_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_3626_26
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27395..28033
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=I2BXF5_PSEFL
hypothetical protein
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
Displaying 26 items

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