ggKbase home page

RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_42635

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_42635_1
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..898
DNA (897bp) protein (299aa)
trmU; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadal
tRNA-specific 2-thiouridylase MnmA n=3 Tax=Pseudomonas RepID=I2BK72_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_42635_2
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

895..1518
DNA (624bp) protein (208aa)
High frequency lysogenization protein HflD homolog n=2 Tax=Pseudomonas fluorescens RepID=I2BM84_PSEFL
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_42635_3
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1644..3014
DNA (1371bp) protein (457aa)
purB; adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
Adenylosuccinate lyase n=2 Tax=Pseudomonas RepID=I2BPT0_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_42635_4
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3099..4265
DNA (1167bp) protein (389aa)
Cupin 4 family protein n=3 Tax=Pseudomonas RepID=I2BS35_PSEFL
cupin 4 family protein
cupin 4 family protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_42635_5
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4258..4680
DNA (423bp) protein (141aa)
Acetyltransferase, GNAT family n=2 Tax=Pseudomonas RepID=I2BPS1_PSEFL
GNAT family acetyltransferase Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
GNAT family acetyltransferase
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_42635_6
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4891..5628
DNA (738bp) protein (246aa)
Type II/III secretion system short domain protein n=3 Tax=Pseudomonas RepID=I2BRL7_PSEFL
type II/III secretion system short domain protein
type II/III secretion system short domain protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_42635_7
Pseudomonas sp. FH1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6122..7447
DNA (1326bp) protein (442aa)
Isocitrate lyase n=6 Tax=Pseudomonas RepID=E2XU99_PSEFL
isocitrate lyase
Isocitrate lyase {ECO:0000313|EMBL:ETK24968.1}; TaxID=1284392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FH1.;"
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_42635_8
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8091..8504
DNA (414bp) protein (138aa)
nuoA; NADH-quinone oxidoreductase, A subunit (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit
NADH-quinone oxidoreductase subunit A n=5 Tax=Pseudomonas RepID=I2BYZ9_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_42635_9
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8515..9189
DNA (675bp) protein (225aa)
NADH dehydrogenase subunit B (EC:1.6.99.5) rbh
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit
NADH-quinone oxidoreductase subunit B n=8 Tax=Pseudomonas RepID=E2XUA0_PSEFL
RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_42635_10
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9261..10898
DNA (1638bp) protein (546aa)
nuoD; NADH-quinone oxidoreductase, C/D subunit (EC:1.6.99.5) Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
nuoD; NADH-quinone oxidoreductase, C/D subunit (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit C/D n=4 Tax=Pseudomonas RepID=I2BXZ4_PSEFL
Displaying 10 items

View Taxonomy