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rifoxya1_sub10_scaffold_223

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxya1_sub10_scaffold_223_1

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1..2796
DNA (2796bp) protein (932aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
nrdJ; ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent, intein-containing (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AEA3_CARHZ
rifoxya1_sub10_scaffold_223_2
CG_Pacearch_06, Pacearchaeota, Archaea

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2802..3425
DNA (624bp) protein (208aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] Tax=CG_Pacearch_06
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] alias=gwa2_scaffold_226_117 id=5042889 tax=GW2011_AR20 species=Aciduliprofundum boonei genus=Aciduliprofundum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota organism_desc=DELETE: see complete genome
Base excision DNA repair protein, HhH-GPD family
rifoxya1_sub10_scaffold_223_3
unknown

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3450..3677
DNA (228bp) protein (76aa)

This feature has no annotations

rifoxya1_sub10_scaffold_223_4
Thermocrinis ruber, Thermocrinis, Aquificales, Aquificae, Aquificae, Bacteria

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3727..4338
DNA (612bp) protein (204aa)
Superoxide dismutase n=1 Tax=Thermocrinis albus (strain DSM 14484 / JCM 11386 / HI 11/12) RepID=D3SM44_THEAH
Superoxide dismutase {ECO:0000313|EMBL:AHE95686.1}; TaxID=932678 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Thermocrinis.;" source="Thermocrinis ruber DSM 12173.;"
superoxide dismutase
rifoxya1_sub10_scaffold_223_5
RIFOXYB2_FULL_WOR_2_38_16_curated, WOR-2, Bacteria

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4341..4988
DNA (648bp) protein (216aa)
hypothetical protein Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
N-glycosylase/DNA lyase alias=gwa2_scaffold_63_256 id=5040692 tax=GW2011_AR5 species=Leptotrichia goodfellowii genus=Leptotrichia taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria organism_desc=gwa2_.48_18
hypothetical protein
rifoxya1_sub10_scaffold_223_6
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5151..5483)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B5N3_METTP
hypothetical protein
rifoxya1_sub10_scaffold_223_7
unknown

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comp(5569..5742)
DNA (174bp) protein (58aa)

This feature has no annotations

rifoxya1_sub10_scaffold_223_8
unknown

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comp(5750..6070)
DNA (321bp) protein (107aa)

This feature has no annotations

rifoxya1_sub10_scaffold_223_9
Sulfolobus islandicus, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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comp(6045..6284)
DNA (240bp) protein (80aa)
Transcriptional regulator, AbrB family n=1 Tax=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) RepID=C4KFS7_SULIK
AbrB family transcriptional regulator
rifoxya1_sub10_scaffold_223_10
unknown

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comp(6593..6874)
DNA (282bp) protein (94aa)

This feature has no annotations

rifoxya1_sub10_scaffold_223_11

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7272..7820
DNA (549bp) protein (183aa)
Type 11 methyltransferase {ECO:0000313|EMBL:KHO46529.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
type 11 methyltransferase alias=gwa2_scaffold_511_37 id=5044248 tax=GW2011_AR4 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_desc=gwa2_.45_18
type 12 methyltransferase
Displaying 11 items

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