ggKbase home page

rifoxya1_sub10_scaffold_5

Search features with annotation key words

Displaying items 1-30 of 115 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxya1_sub10_scaffold_5_1
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

2..163
DNA (162bp) protein (54aa)
hypothetical protein; K10747 DNA ligase 1 [EC:6.5.1.1] Tax=RBG_16_Pacearchaeota_35_8_curated
DNA ligase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DFB4_9EURY
DNA ligase I, ATP-dependent (dnl1)
rifoxya1_sub10_scaffold_5_2
unknown

Not on your lists

comp(107..478)
DNA (372bp) protein (124aa)

This feature has no annotations

rifoxya1_sub10_scaffold_5_3
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

681..1259
DNA (579bp) protein (193aa)
2-alkenal reductase; K03120 transcription initiation factor TFIID TATA-box-binding protein Tax=RBG_16_Pacearchaeota_35_8_curated
TATA-box-binding protein alias=gwa2_scaffold_2898_29 id=5048857 tax=GW2011_AR18 species=Archaeoglobus fulgidus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota organism_desc=gwa2_.30_20c
TATA-box-binding protein
rifoxya1_sub10_scaffold_5_4
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

1347..3395
DNA (2049bp) protein (683aa)
mcm; replicative DNA helicase Mcm (EC:3.6.1.-); K10726 replicative DNA helicase Mcm [EC:3.6.4.-] Tax=RBG_13_Pacearchaeota_33_26_curated
DNA replication initiator Cdc21/Cdc54
DNA replication initiator (Cdc21/Cdc54) alias=gwa2_scaffold_32_337 id=5040205 tax=GW2011_AR20 species=Candidatus Haloredivivus sp. G17 genus=unknown taxon_order=unknown taxon_class=Nanohaloarchaea phylum=Euryarchaeota organism_desc=DELETE: see complete genome rbh
rifoxya1_sub10_scaffold_5_5
unknown

Not on your lists

3670..3918
DNA (249bp) protein (83aa)

This feature has no annotations

rifoxya1_sub10_scaffold_5_6
AR1, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(3948..4577)
DNA (630bp) protein (210aa)
hypothetical protein
alias=gwa2_scaffold_1845_42 id=5047103 tax=GW2011_AR20 organism_desc=DELETE: see complete genome
Tax=AR1
rifoxya1_sub10_scaffold_5_7
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(4579..5007)
DNA (429bp) protein (143aa)
Tax=CG_Pacearch_06
rifoxya1_sub10_scaffold_5_8
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

5230..5856
DNA (627bp) protein (209aa)
hypothetical protein Tax=RBG_13_Pacearchaeota_33_26_curated
hypothetical protein
Uncharacterized protein conserved in archaea alias=gwa2_scaffold_32_338 id=5040206 tax=GW2011_AR20 species=Candidatus Nanosalina sp. J07AB43 genus=Candidatus Nanosalina taxon_order=unknown taxon_class=Nanohaloarchaea phylum=Euryarchaeota organism_desc=DELETE: see complete genome
rifoxya1_sub10_scaffold_5_9
unknown

Not on your lists

5859..6131
DNA (273bp) protein (91aa)

This feature has no annotations

rifoxya1_sub10_scaffold_5_10
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

6243..6653
DNA (411bp) protein (137aa)
eif2b; translation initiation factor 2 subunit beta (aeIF-2b); K03238 translation initiation factor 2 subunit 2 Tax=RBG_13_Pacearchaeota_33_26_curated
Translation initiation factor 2 subunit beta
eIF2B; translation initiation factor aIF-2, beta subunit; K03238 translation initiation factor 2 subunit 2 alias=gwa2_scaffold_32_340 id=5040208 tax=GW2011_AR20 species=unknown genus=Methanothermobacter taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota organism_desc=DELETE: see complete genome
rifoxya1_sub10_scaffold_5_11
GWC1_OP11_42_9, Woesebacteria, Microgenomates, Bacteria

Not on your lists

6746..6937
DNA (192bp) protein (64aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS76734.1}; TaxID=1618584 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWC1_42_9.;"
alias=OP11_3_314 id=5087766 tax=OP11_3 organism_desc=Complete genome
rifoxya1_sub10_scaffold_5_12
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

7002..7301
DNA (300bp) protein (100aa)
hypothetical protein; K09148 hypothetical protein Tax=RBG_16_Pacearchaeota_35_8_curated
Uncharacterized protein alias=AR15_final_v5_576 id=5800099 tax=GW2011_AR15
hypothetical protein
rifoxya1_sub10_scaffold_5_13
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

7343..7687
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000363D148
translation initiation factor IF-1; K03236 translation initiation factor 1A Tax=RBG_13_Pacearchaeota_33_26_curated
Translation initiation factor 1A
rifoxya1_sub10_scaffold_5_14

Not on your lists


7730..8230
DNA (501bp) protein (167aa)
Conserved Archaeal protein n=3 Tax=Sulfolobus acidocaldarius RepID=Q4JA52_SULAC
Marine sediment metagenome DNA, contig: S12H4_C04473 {ECO:0000313|EMBL:GAI63470.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
putative RNA-processing protein
rifoxya1_sub10_scaffold_5_15
unknown

Not on your lists

8573..8986
DNA (414bp) protein (138aa)

This feature has no annotations

rifoxya1_sub10_scaffold_5_16
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

9026..9595
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI000372BC09
nitroreductase Tax=AR19
hypothetical protein
rifoxya1_sub10_scaffold_5_17
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

9597..10172
DNA (576bp) protein (192aa)
Uncharacterized protein Tax=RBG_16_Pacearchaeota_35_8_curated
rifoxya1_sub10_scaffold_5_18
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(10251..11330)
DNA (1080bp) protein (360aa)
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=CG_Pacearch_01
Cell division protein FtsZ alias=gwa2_scaffold_6785_22 id=5051045 tax=GW2011_AR18 species=unknown genus=Candidatus Parvarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota organism_desc=gwa2_.30_20c
Cell division protein FtsZ
rifoxya1_sub10_scaffold_5_19

Not on your lists

comp(11569..12036)
DNA (468bp) protein (156aa)
Uncharacterized protein {ECO:0000313|EMBL:AIF18646.1}; TaxID=1456522 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_83_G03.;"
rifoxya1_sub10_scaffold_5_20
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(12040..12582)
DNA (543bp) protein (181aa)
tyw3, zgc:92277; tRNA-yW synthesizing protein 3 homolog (S. cerevisiae) (EC:2.1.1.-); K15450 tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.-] Tax=RBG_13_Pacearchaeota_33_26_curated
UPI00021A58A9 related cluster alias=AR15_final_v5_1208 id=5800731 tax=GW2011_AR15 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown
hypothetical protein
rifoxya1_sub10_scaffold_5_21
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(12579..13610)
DNA (1032bp) protein (344aa)
id=5045706 Tax=CG_Pacearch_01
hypothetical protein
alias=gwa2_scaffold_7094_30 id=5051139 tax=GW2011_AR10 organism_desc=gwa2_.44_58 (temp)
rifoxya1_sub10_scaffold_5_22
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(13610..14266)
DNA (657bp) protein (219aa)
hypothetical protein Tax=RBG_13_Pacearchaeota_33_26_curated
Uncharacterized protein alias=AR15_final_v5_331 id=5799854 tax=GW2011_AR15 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria
hypothetical protein
rifoxya1_sub10_scaffold_5_23
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(14299..15606)
DNA (1308bp) protein (436aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VZH9_9EURY rbh
Glutamyl-tRNA(Gln) amidotransferase subunit A Tax=AR13
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A
rifoxya1_sub10_scaffold_5_24
Synergistes jonesii, Synergistes, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(15603..16322)
DNA (720bp) protein (240aa)
Amidohydrolase 2 n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LJT3_SYNFM
Uncharacterized protein {ECO:0000313|EMBL:KEJ92336.1}; TaxID=2754 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Synergistes.;" source="Synergistes jonesii.;"
amidohydrolase 2
rifoxya1_sub10_scaffold_5_25
unknown

Not on your lists

comp(16316..16564)
DNA (249bp) protein (83aa)

This feature has no annotations

rifoxya1_sub10_scaffold_5_26
GWA1_OD1_36_12, Parcubacteria, Bacteria

Not on your lists

comp(16634..16981)
DNA (348bp) protein (116aa)
Tax=GWA1_OD1_36_12
rifoxya1_sub10_scaffold_5_27
GWA1_OD1_36_12, Parcubacteria, Bacteria

Not on your lists

comp(16957..17295)
DNA (339bp) protein (113aa)
Tax=GWA1_OD1_36_12
rifoxya1_sub10_scaffold_5_28
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(17329..18180)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000364EA5D
hypothetical protein; K07096 Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein
rifoxya1_sub10_scaffold_5_29
Plasmodium reichenowi, Plasmodium, Haemosporida, Aconoidasida, Apicomplexa, Eukaryota

Not on your lists

comp(18454..18693)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2RUJ4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:CDO61945.1}; Flags: Fragment;; TaxID=5854 species="Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Lavera
hypothetical protein
rifoxya1_sub10_scaffold_5_30
unknown

Not on your lists

comp(18774..18872)
DNA (99bp) protein (33aa)

This feature has no annotations

Displaying items 1-30 of 115 in total

View Taxonomy