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rifoxya1_sub10_scaffold_20

Search features with annotation key words

Displaying items 1-30 of 81 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxya1_sub10_scaffold_20_1
CG_Pacearch_02, Pacearchaeota, Archaea

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comp(1..999)
DNA (999bp) protein (333aa)
polysaccharide biosynthesis-like protein Tax=CG_Pacearch_02
Polysaccharide biosynthesis protein
polysaccharide biosynthesis protein alias=gwa2_scaffold_32_485 id=5040353 tax=GW2011_AR20 species=Methanosarcina acetivorans genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota organism_desc=DELETE: see complete genome
rifoxya1_sub10_scaffold_20_2

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1098..2450
DNA (1353bp) protein (451aa)
Marine sediment metagenome DNA, contig: S12H4_S03015 {ECO:0000313|EMBL:GAJ01695.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifoxya1_sub10_scaffold_20_3

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2504..3226
DNA (723bp) protein (241aa)
Uncharacterized protein {ECO:0000313|EMBL:EKE19391.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
cyj:Cyan7822_4440 family 2 glycosyl transferase alias=ACD9_125096.5517.8G0003,ACD9_125096.5517.8_3,ACD9_C00172G00003 id=138549 tax=ACD9 species=Cyanothece sp. PCC 7822 genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria organism_group=OD1-i organism_desc=OD1-i rbh
glycosyl transferase family protein
rifoxya1_sub10_scaffold_20_4
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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comp(3227..4612)
DNA (1386bp) protein (462aa)
radical SAM domain-containing protein (EC:1.14.13.81); K04035 magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase [EC:1.14.13.81] Tax=GWF2_Lentisphaerae_49_21_curated
radical SAM domain-containing protein (EC:1.14.13.81)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A7599 rbh
rifoxya1_sub10_scaffold_20_5
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(4657..5115)
DNA (459bp) protein (153aa)
Marine sediment metagenome DNA, contig: S01H4_S10537 Tax=RBG_13_Pacearchaeota_33_26_curated
rifoxya1_sub10_scaffold_20_6

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comp(5160..6716)
DNA (1557bp) protein (519aa)
SecD/SecF/SecDF export membrane protein {ECO:0000313|EMBL:KHO52336.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
SecD/SecF/SecDF export membrane protein
SecD/SecF/SecDF export membrane protein alias=gwa2_scaffold_32_15 id=5039883 tax=GW2011_AR20 species=Candidatus Parvarchaeum acidiphilum genus=Candidatus Parvarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota organism_desc=DELETE: see complete genome
rifoxya1_sub10_scaffold_20_7

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comp(6689..7567)
DNA (879bp) protein (293aa)
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
Protein-export membrane protein SecF alias=gwa2_scaffold_1256_82 id=5045761 tax=GW2011_AR18 species=Methanomethylovorans hollandica genus=Methanomethylovorans taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota organism_desc=gwa2_.30_20c
Protein-export membrane protein SecF
rifoxya1_sub10_scaffold_20_8
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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8051..8332
DNA (282bp) protein (94aa)
Tax=RBG_13_Pacearchaeota_33_26_curated
rifoxya1_sub10_scaffold_20_9
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(8324..9046)
DNA (723bp) protein (241aa)
DNA-directed RNA polymerase subunit D (EC:2.7.7.6); K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=RBG_13_Pacearchaeota_33_26_curated
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003621DCB
DNA-directed RNA polymerase subunit D
rifoxya1_sub10_scaffold_20_10
AR13, Pacearchaeaota, DPANN, Archaea

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comp(9081..9569)
DNA (489bp) protein (163aa)
40S ribosomal protein S14 n=1 Tax=Guillardia theta RepID=Q98S22_GUITH
30S ribosomal protein S11 Tax=AR13
rps11p; 30S ribosomal protein S11
rifoxya1_sub10_scaffold_20_11
CG_Pacearch_01, Pacearchaeota, Archaea

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comp(9562..10071)
DNA (510bp) protein (170aa)
30S ribosomal protein S4 n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VS30_9EURY
rps4p; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=CG_Pacearch_01
30S ribosomal protein S4
rifoxya1_sub10_scaffold_20_12
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(10074..10529)
DNA (456bp) protein (152aa)
rps13p; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RBG_13_Pacearchaeota_33_26_curated
30S ribosomal protein S13
rps13p; 30S ribosomal protein S13P; K02952 small subunit ribosomal protein S13 alias=gwa2_scaffold_1845_7 id=5047068 tax=GW2011_AR20 species=Nanoarchaeum equitans genus=Nanoarchaeum taxon_order=unknown taxon_class=unknown phylum=Nanoarchaeota organism_desc=DELETE: see complete genome
rifoxya1_sub10_scaffold_20_13
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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comp(10543..11085)
DNA (543bp) protein (181aa)
hypothetical protein; K07572 putative nucleotide binding protein Tax=RBG_16_Pacearchaeota_35_8_curated
DNA-binding protein
DNA-binding protein; K07572 putative nucleotide binding protein alias=gwa2_scaffold_1845_9 id=5047070 tax=GW2011_AR20 species=unknown genus=Pyrococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota organism_desc=DELETE: see complete genome
rifoxya1_sub10_scaffold_20_14

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comp(11091..11396)
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E07C5
Uncharacterized protein {ECO:0000313|EMBL:KHO51449.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
rifoxya1_sub10_scaffold_20_15

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comp(11397..11660)
DNA (264bp) protein (88aa)
50S ribosomal protein L21e n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LLE8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KHO51448.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
50S ribosomal protein L21e
rifoxya1_sub10_scaffold_20_16

Not on your lists

comp(11701..11898)
DNA (198bp) protein (66aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51447.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
rifoxya1_sub10_scaffold_20_17

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comp(11969..13177)
DNA (1209bp) protein (403aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO49496.1}; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
hypothetical protein; K02004 putative ABC transport system permease protein alias=gwa2_scaffold_1391_73 id=5046030 tax=GW2011_AR4 species=Methanococcus maripaludis genus=Methanococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota organism_desc=gwa2_.45_18 rbh
hypothetical protein
rifoxya1_sub10_scaffold_20_18
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(13182..14060)
DNA (879bp) protein (293aa)
id=5103794 Tax=RBG_16_Pacearchaeota_35_8_curated
hypothetical protein
seg alias=gwa2_scaffold_111_63 id=5041498 tax=GW2011_AR20 organism_desc=DELETE: see complete genome
rifoxya1_sub10_scaffold_20_19
unknown

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comp(14057..14419)
DNA (363bp) protein (121aa)

This feature has no annotations

rifoxya1_sub10_scaffold_20_20
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(14416..15093)
DNA (678bp) protein (226aa)
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein Tax=RBG_13_Pacearchaeota_33_26_curated
ABC transport system protein
ABC transport system protein alias=gwa2_scaffold_111_64 id=5041499 tax=GW2011_AR20 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_desc=DELETE: see complete genome
rifoxya1_sub10_scaffold_20_21
CG_Pacearch_01, Pacearchaeota, Archaea

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15181..15375
DNA (195bp) protein (65aa)
DNA-directed RNA polymerase subunit N (EC:2.7.7.6); K03058 DNA-directed RNA polymerase subunit N [EC:2.7.7.6] Tax=CG_Pacearch_01
RNA polymerase, N/8 Kd subunits; K03058 DNA-directed RNA polymerase subunit N [EC:2.7.7.6] alias=gwa2_scaffold_226_218 id=5042990 tax=GW2011_AR20 species=uncultured organism HF70_19B12 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_desc=DELETE: see complete genome
DNA-directed RNA polymerase subunit N
rifoxya1_sub10_scaffold_20_22
AR13, Pacearchaeaota, DPANN, Archaea

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comp(15378..15635)
DNA (258bp) protein (86aa)
Tax=AR13
rifoxya1_sub10_scaffold_20_23
Fusobacterium mortiferum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(15854..16855)
DNA (1002bp) protein (334aa)
Bifunctional protein RfaE, domain I {ECO:0000313|EMBL:EEO34510.1}; EC=2.7.1.- {ECO:0000313|EMBL:EEO34510.1};; TaxID=469616 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacte
Bifunctional protein RfaE, domain I n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3W9H3_FUSMR
rfaE bifunctional protein
rifoxya1_sub10_scaffold_20_24
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists


16993..17373
DNA (381bp) protein (127aa)
50S ribosomal protein L18e n=1 Tax=Caldisphaera lagunensis (strain DSM 15908 / JCM 11604 / IC-154) RepID=L0AB02_CALLD
50S ribosomal protein L18e Tax=AR13
ribosomal protein L18E
rifoxya1_sub10_scaffold_20_25

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17370..17768
DNA (399bp) protein (133aa)
50S ribosomal protein L13 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T6E8_9EURY
Large subunit ribosomal protein L13 {ECO:0000313|EMBL:KHO55551.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
50S ribosomal protein L13P
rifoxya1_sub10_scaffold_20_26
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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17765..18166
DNA (402bp) protein (134aa)
30S ribosomal protein S9 n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000363BEDB
rps9p; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RBG_13_Pacearchaeota_33_26_curated
30S ribosomal protein S9
rifoxya1_sub10_scaffold_20_27

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comp(18163..18564)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000382DD02
Marine sediment metagenome DNA, contig: S06H3_L03780 {ECO:0000313|EMBL:GAI16792.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
putative bacteriophage 370.1 integrase
rifoxya1_sub10_scaffold_20_28
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(18577..19368)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000382DD02 rbh
putative bacteriophage 370.1 integrase Tax=CG_Woesearch_02
resolvase, N terminal domain protein
rifoxya1_sub10_scaffold_20_29
unknown

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comp(19365..19790)
DNA (426bp) protein (142aa)

This feature has no annotations

rifoxya1_sub10_scaffold_20_30
unknown

Not on your lists

comp(19875..20093)
DNA (219bp) protein (73aa)

This feature has no annotations

Displaying items 1-30 of 81 in total

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