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rifoxya1_sub10_scaffold_41

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Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxya1_sub10_scaffold_41_1

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1..111
DNA (111bp) protein (37aa)
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1394710 species="Bacteria; candidate division WWE3.;" sourc
hypothetical protein
ttr:Tter_1827 translation elongation factor Tu; K02358 elongation factor Tu alias=RAAC2_WWE3_C00001G00058,RAAC2_WWE3_58 id=725105 tax=RAAC2_WWE3 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=WWE3
rifoxya1_sub10_scaffold_41_2
RIFOXYD1_FULL_WWE3_43_17_curated, WWE3, Bacteria

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163..483
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=candidate division WWE3 bacterium RAAC2_WWE3_1 RepID=V5RT18_9BACT
30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=RIFOXYD1_FULL_WWE3_43_17_curated
hypothetical protein
rifoxya1_sub10_scaffold_41_3
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

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647..1075
DNA (429bp) protein (143aa)
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=RIFOXYD2_FULL_WWE3_43_10_curated
rplC; 50S ribosomal protein L3
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 alias=RAAC2_WWE3_C00001G00060,RAAC2_WWE3_60 id=725107 tax=RAAC2_WWE3 species=unknown genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=WWE3
rifoxya1_sub10_scaffold_41_4
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

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1077..1700
DNA (624bp) protein (208aa)
50S ribosomal protein L4 n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3776E alias=RAAC2_WWE3_C00001G00061,RAAC2_WWE3_61 id=725108 tax=RAAC2_WWE3 species=Ruminococcus flavefaciens genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=WWE3 rbh
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=RIFOXYD2_FULL_WWE3_43_10_curated
50S ribosomal protein L4
rifoxya1_sub10_scaffold_41_5
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

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1697..1987
DNA (291bp) protein (97aa)
50S ribosomal protein L23 n=1 Tax=Mycoplasma alligatoris A21JP2 RepID=D4XVJ3_9MOLU alias=RAAC2_WWE3_C00001G00062,RAAC2_WWE3_62 id=725109 tax=RAAC2_WWE3 species=Mycoplasma alligatoris genus=Mycoplasma taxon_order=Mycoplasmatales taxon_class=Mollicutes phylum=Tenericutes organism_group=WWE3
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=RIFOXYD2_FULL_WWE3_43_10_curated
50S ribosomal protein L23
rifoxya1_sub10_scaffold_41_6
GWB2_WWE3_43_22_part, WWE3, Bacteria

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1992..2825
DNA (834bp) protein (278aa)
50S ribosomal protein L2 {ECO:0000313|EMBL:KKT11775.1}; TaxID=1619118 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWB2_43_22.;"
rplB; 50S ribosomal protein L2
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 alias=RAAC2_WWE3_C00001G00063,RAAC2_WWE3_63 id=725110 tax=RAAC2_WWE3 species=unknown genus=unknown taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_group=WWE3 rbh
rifoxya1_sub10_scaffold_41_7

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2896..3165
DNA (270bp) protein (90aa)
30S ribosomal protein S19 n=1 Tax=uncultured bacterium RepID=K2CQ15_9BACT
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rpsS; ribosomal protein S19
rifoxya1_sub10_scaffold_41_8
GWB2_WWE3_43_22_part, WWE3, Bacteria

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3170..3523
DNA (354bp) protein (118aa)
50S ribosomal protein L22 {ECO:0000313|EMBL:KKT09464.1}; TaxID=1619118 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWB2_43_22.;"
rplV; 50S ribosomal protein L22
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 alias=RAAC2_WWE3_C00001G00065,RAAC2_WWE3_65 id=725112 tax=RAAC2_WWE3 species=Buchnera aphidicola genus=Buchnera taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=WWE3
rifoxya1_sub10_scaffold_41_9
GWB2_WWE3_43_22_part, WWE3, Bacteria

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3528..4160
DNA (633bp) protein (211aa)
30S ribosomal protein S3 {ECO:0000313|EMBL:KKT09465.1}; TaxID=1619118 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWB2_43_22.;"
rpsC; 30S ribosomal protein S3
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 alias=RAAC2_WWE3_C00001G00066,RAAC2_WWE3_66 id=725113 tax=RAAC2_WWE3 species=unknown genus=unknown taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_group=WWE3 rbh
rifoxya1_sub10_scaffold_41_10
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

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4163..4570
DNA (408bp) protein (136aa)
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFOXYD2_FULL_WWE3_43_10_curated
rplP; 50S ribosomal protein L16
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 alias=RAAC2_WWE3_C00001G00067,RAAC2_WWE3_67 id=725114 tax=RAAC2_WWE3 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi organism_group=WWE3
rifoxya1_sub10_scaffold_41_11
GWB2_WWE3_43_22_part, WWE3, Bacteria

Not on your lists


4575..4787
DNA (213bp) protein (71aa)
50S ribosomal protein L29 {ECO:0000313|EMBL:KKT09467.1}; TaxID=1619118 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWB2_43_22.;"
hypothetical protein
coiled-coil 11..32 alias=RAAC2_WWE3_C00001G00068,RAAC2_WWE3_68 id=725115 tax=RAAC2_WWE3 organism_group=WWE3
rifoxya1_sub10_scaffold_41_12
GWB2_WWE3_43_22_part, WWE3, Bacteria

Not on your lists


4789..5067
DNA (279bp) protein (93aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT09468.1}; TaxID=1619118 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWB2_43_22.;"
hypothetical protein
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 alias=RAAC2_WWE3_C00001G00069,RAAC2_WWE3_69 id=725116 tax=RAAC2_WWE3 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=WWE3
rifoxya1_sub10_scaffold_41_13
GWF2_WWE3_42_42, WWE3, Bacteria

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5069..5434
DNA (366bp) protein (122aa)
50S ribosomal protein L14 {ECO:0000313|EMBL:KKS59507.1}; TaxID=1619142 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWF2_42_42.;"
hypothetical protein
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 alias=RAAC2_WWE3_C00001G00070,RAAC2_WWE3_70 id=725117 tax=RAAC2_WWE3 species=Coriobacterium glomerans genus=Coriobacterium taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria organism_group=WWE3
rifoxya1_sub10_scaffold_41_14
GWB2_WWE3_43_22_part, WWE3, Bacteria

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5439..5762
DNA (324bp) protein (108aa)
50S ribosomal protein L24 n=1 Tax=candidate division WWE3 bacterium RAAC2_WWE3_1 RepID=V5RS61_9BACT
50S ribosomal protein L24 {ECO:0000313|EMBL:KKT09470.1}; TaxID=1619118 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWB2_43_22.;"
50S ribosomal protein L24
rifoxya1_sub10_scaffold_41_15
GWB2_WWE3_43_22_part, WWE3, Bacteria

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5759..6304
DNA (546bp) protein (182aa)
50S ribosomal protein L5 n=1 Tax=candidate division WWE3 bacterium RAAC2_WWE3_1 RepID=V5RRS1_9BACT rbh
50S ribosomal protein L5 {ECO:0000313|EMBL:KKT09471.1}; TaxID=1619118 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWB2_43_22.;"
rplE; 50S ribosomal protein L5
rifoxya1_sub10_scaffold_41_16
GWB2_WWE3_43_22_part, WWE3, Bacteria

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6493..6891
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=candidate division WWE3 bacterium RAAC2_WWE3_1 RepID=V5RTW0_9BACT
30S ribosomal protein S8 {ECO:0000313|EMBL:KKT09472.1}; TaxID=1619118 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWB2_43_22.;"
rpsH; 30S ribosomal protein S8
rifoxya1_sub10_scaffold_41_17
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

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6894..7442
DNA (549bp) protein (183aa)
50S ribosomal protein L6 n=1 Tax=candidate division WWE3 bacterium RAAC2_WWE3_1 RepID=V5RT30_9BACT rbh
rplF; 50S ribosomal protein L6 Tax=RIFOXYD2_FULL_WWE3_43_10_curated
50S ribosomal protein L6
rifoxya1_sub10_scaffold_41_18
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

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7448..7807
DNA (360bp) protein (120aa)
50S ribosomal protein L18 n=1 Tax=candidate division WWE3 bacterium RAAC2_WWE3_1 RepID=V5RRK3_9BACT
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RIFOXYD2_FULL_WWE3_43_10_curated
rplR; 50S ribosomal protein L18
rifoxya1_sub10_scaffold_41_19
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

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7804..8262
DNA (459bp) protein (153aa)
rpsE; 30S ribosomal protein S5 Tax=RIFOXYD2_FULL_WWE3_43_10_curated
rpsE; 30S ribosomal protein S5
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 alias=RAAC2_WWE3_C00001G00076,RAAC2_WWE3_76 id=725123 tax=RAAC2_WWE3 species=unknown genus=Campylobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria organism_group=WWE3
rifoxya1_sub10_scaffold_41_20
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

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8266..8703
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=candidate division WWE3 bacterium RAAC2_WWE3_1 RepID=V5RRS4_9BACT
rplO; 50S ribosomal protein L15 Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein
rifoxya1_sub10_scaffold_41_21

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8696..9952
DNA (1257bp) protein (419aa)
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1394710 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium
hypothetical protein
sti:Sthe_1056 preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY alias=RAAC2_WWE3_C00001G00078,RAAC2_WWE3_78 id=725125 tax=RAAC2_WWE3 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=WWE3 rbh
rifoxya1_sub10_scaffold_41_22
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

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9964..10230
DNA (267bp) protein (89aa)
YbaB-like 5..88 Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein
YbaB-like 5..88 alias=RAAC2_WWE3_C00001G00079,RAAC2_WWE3_79 id=725126 tax=RAAC2_WWE3 organism_group=WWE3
rifoxya1_sub10_scaffold_41_23
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

10238..10852
DNA (615bp) protein (205aa)
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] Tax=RIFOXYD2_FULL_WWE3_43_10_curated
Uncharacterized protein n=1 Tax=candidate division WWE3 bacterium RAAC2_WWE3_1 RepID=V5RRK8_9BACT rbh
hypothetical protein
rifoxya1_sub10_scaffold_41_24
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

10887..11222
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Microgenomates bacterium SCGC AAA040-P11 RepID=UPI00036B2886
hypothetical protein Tax=RIFOXYD2_FULL_WWE3_43_10_curated
rifoxya1_sub10_scaffold_41_25

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11291..12283
DNA (993bp) protein (331aa)
Uncharacterized protein {ECO:0000313|EMBL:AHB40028.1}; TaxID=1394710 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium RAAC2_WWE3_1.;"
hypothetical protein
hypothetical protein alias=RAAC2_WWE3_C00001G00081,RAAC2_WWE3_81 id=725128 tax=RAAC2_WWE3 species=Paenibacillus sp. HGF7 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_group=WWE3 rbh
rifoxya1_sub10_scaffold_41_26
GWF2_WWE3_42_42, WWE3, Bacteria

Not on your lists

12280..12540
DNA (261bp) protein (87aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS59494.1}; TaxID=1619142 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWF2_42_42.;"
hypothetical protein
transmembrane_regions 9..31 alias=RAAC2_WWE3_C00001G00082,RAAC2_WWE3_82 id=725129 tax=RAAC2_WWE3 organism_group=WWE3
rifoxya1_sub10_scaffold_41_27
GWD2_WWE3_42_34, WWE3, Bacteria

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12543..13667
DNA (1125bp) protein (375aa)
dolichyl-phosphate beta-D-mannosyltransferase (EC:2.4.1.83); K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] alias=RAAC2_WWE3_C00001G00083,RAAC2_WWE3_83 id=725130 tax=RAAC2_WWE3 species=Nitrosospira multiformis genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria organism_group=WWE3 rbh
Dolichyl-phosphate beta-D-mannosyltransferase Tax=GWD2_WWE3_42_34
hypothetical protein
rifoxya1_sub10_scaffold_41_28
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

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13673..14431
DNA (759bp) protein (253aa)
Glycosyl transferase family 2 protein n=2 Tax=Bacteria RepID=V5RT41_9BACT rbh
family 2 glycosyl transferase Tax=RIFOXYC1_FULL_WWE3_42_17_curated
glycosyl transferase family 2 protein
rifoxya1_sub10_scaffold_41_29
GWD2_WWE3_42_34, WWE3, Bacteria

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14484..15869
DNA (1386bp) protein (462aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=V5RRL2_9BACT rbh
Nucleotide sugar dehydrogenase Tax=GWD2_WWE3_42_34
hypothetical protein
rifoxya1_sub10_scaffold_41_30
GWD2_WWE3_42_34, WWE3, Bacteria

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15847..17064
DNA (1218bp) protein (406aa)
Glycosyltransferase RedB Tax=GWD2_WWE3_42_34
group 1 glycosyl transferase
group 1 glycosyl transferase alias=RAAC2_WWE3_C00001G00086,RAAC2_WWE3_86 id=725133 tax=RAAC2_WWE3 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria organism_group=WWE3 rbh
Displaying items 1-30 of 39 in total

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