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rifoxya1_sub10_scaffold_63

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxya1_sub10_scaffold_63_1
GWB2_WWE3_43_22_part, WWE3, Bacteria

Not on your lists

254..697
DNA (444bp) protein (148aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT11965.1}; TaxID=1619118 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWB2_43_22.;"
hypothetical protein
transmembrane_regions 7..26 alias=RAAC2_WWE3_C00001G00281,RAAC2_WWE3_281 id=725328 tax=RAAC2_WWE3 organism_group=WWE3
rifoxya1_sub10_scaffold_63_2
GWB2_WWE3_43_22_part, WWE3, Bacteria

Not on your lists

comp(699..1880)
DNA (1182bp) protein (394aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT11966.1}; TaxID=1619118 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWB2_43_22.;"
hypothetical protein
hypothetical protein; K02004 putative ABC transport system permease protein alias=RAAC2_WWE3_C00001G00280,RAAC2_WWE3_280 id=725327 tax=RAAC2_WWE3 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=WWE3 rbh
rifoxya1_sub10_scaffold_63_3
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

comp(1877..2548)
DNA (672bp) protein (224aa)
Abc transporter related protein n=2 Tax=Bacteria RepID=V5RTP7_9BACT rbh
ABC transporter; K02003 putative ABC transport system ATP-binding protein Tax=RIFOXYD2_FULL_WWE3_43_10_curated
Abc transporter related protein
rifoxya1_sub10_scaffold_63_4
GWB2_WWE3_43_22_part, WWE3, Bacteria

Not on your lists

comp(2550..3611)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=V5RUI9_9BACT rbh
AcrA protein {ECO:0000313|EMBL:KKT11968.1}; TaxID=1619118 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWB2_43_22.;"
hypothetical protein
rifoxya1_sub10_scaffold_63_5
GWB2_WWE3_43_22_part, WWE3, Bacteria

Not on your lists

3632..4021
DNA (390bp) protein (130aa)
Diacylglycerol kinase {ECO:0000313|EMBL:KKT11969.1}; TaxID=1619118 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWB2_43_22.;"
seg 36..45 alias=ACD24_223812.2574.9G0002,ACD24_223812.2574.9_2,ACD24_C00148G00002 id=28417 tax=ACD24 species=WWE3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=WWE3 organism_desc=WWE3
diacylglycerol kinase
rifoxya1_sub10_scaffold_63_6
GWB2_WWE3_43_22_part, WWE3, Bacteria

Not on your lists

comp(4010..4498)
DNA (489bp) protein (163aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT11970.1}; TaxID=1619118 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWB2_43_22.;"
hypothetical protein
transmembrane_regions 42..64 alias=ACD24_223812.2574.9_3,ACD24_223812.2574.9G0003,ACD24_C00148G00003 id=28419 tax=ACD24 species=WWE3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=WWE3 organism_desc=WWE3 rbh
rifoxya1_sub10_scaffold_63_7
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

comp(4505..6055)
DNA (1551bp) protein (517aa)
Glycosyl transferase family 39 n=2 Tax=Bacteria RepID=V5RS58_9BACT rbh
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase Tax=RIFOXYD2_FULL_WWE3_43_10_curated
Glycosyl transferase family 39
rifoxya1_sub10_scaffold_63_8
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

comp(6030..8096)
DNA (2067bp) protein (689aa)
ATP-dependent DNA helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.1.-] alias=ACD24_29788.2312.9G0001,ACD24_29788.2312.9_1,ACD24_C00291G00001 id=29095 tax=ACD24 species=[Clostridium] difficile genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=WWE3 organism_desc=WWE3 rbh
UvrD/Rep helicase
rifoxya1_sub10_scaffold_63_9
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

comp(8098..8778)
DNA (681bp) protein (227aa)
tetrapyrrole methylase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=RIFOXYD2_FULL_WWE3_43_10_curated
Uncharacterized protein n=1 Tax=candidate division WWE3 bacterium RAAC2_WWE3_1 RepID=V5RUI4_9BACT rbh
hypothetical protein
rifoxya1_sub10_scaffold_63_10
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

8803..9846
DNA (1044bp) protein (348aa)
tRNA-guanine transglycosylase, various specificities (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=RIFOXYD2_FULL_WWE3_43_10_curated
rca:Rcas_3266 tRNA-guanine transglycosylase, various specificities (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] alias=RAAC2_WWE3_C00001G00272,RAAC2_WWE3_272 id=725319 tax=RAAC2_WWE3 species=Pseudomonas aeruginosa genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=WWE3 rbh
hypothetical protein
rifoxya1_sub10_scaffold_63_11
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

9909..11315
DNA (1407bp) protein (469aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=RIFOXYD2_FULL_WWE3_43_10_curated
ttr:Tter_0998 (p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] alias=RAAC2_WWE3_C00001G00271,RAAC2_WWE3_271 id=725318 tax=RAAC2_WWE3 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=WWE3 rbh
hypothetical protein
rifoxya1_sub10_scaffold_63_12
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists


comp(11329..11505)
DNA (177bp) protein (59aa)
Ribosomal protein L33 n=2 Tax=Bacteria RepID=V5RS53_9BACT
prpL33; plastid/chloroplast ribosomal protein L33 Tax=RIFOXYD2_FULL_WWE3_43_10_curated
prpL33; ribosomal protein L33
rifoxya1_sub10_scaffold_63_13
GWB2_WWE3_43_22_part, WWE3, Bacteria

Not on your lists


11562..14027
DNA (2466bp) protein (822aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=V5RTN5_9BACT rbh
Leucine-tRNA ligase {ECO:0000313|EMBL:KKT11999.1}; TaxID=1619118 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWB2_43_22.;"
hypothetical protein
rifoxya1_sub10_scaffold_63_14
GWB2_WWE3_43_22_part, WWE3, Bacteria

Not on your lists

comp(14071..14814)
DNA (744bp) protein (248aa)
26 kDa periplasmic immunogenic protein n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CIP6_9RHOB alias=RAAC2_WWE3_C00001G00268,RAAC2_WWE3_268 id=725315 tax=RAAC2_WWE3 species=Roseibium sp. TrichSKD4 genus=Roseibium taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria organism_group=WWE3 rbh
26 kDa periplasmic immunogenic protein {ECO:0000313|EMBL:KKT11998.1}; TaxID=1619118 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWB2_43_22.;"
26 kDa periplasmic immunogenic protein
rifoxya1_sub10_scaffold_63_15
GWB2_WWE3_43_22_part, WWE3, Bacteria

Not on your lists

14871..15650
DNA (780bp) protein (260aa)
Methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18] alias=RAAC2_WWE3_C00001G00267,RAAC2_WWE3_267 id=725314 tax=RAAC2_WWE3 species=Thermotoga neapolitana genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae organism_group=WWE3 rbh
Methionine aminopeptidase {ECO:0000313|EMBL:KKT11997.1}; TaxID=1619118 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWB2_43_22.;"
hypothetical protein
rifoxya1_sub10_scaffold_63_16
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

15647..16753
DNA (1107bp) protein (369aa)
seg 23..41 Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein
seg 23..41 alias=ACD24_C00295G00002,ACD24_2949.2261.8G0002,ACD24_2949.2261.8_2 id=29111 tax=ACD24 species=WWE3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=WWE3 organism_desc=WWE3 rbh
rifoxya1_sub10_scaffold_63_17
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

16808..18037
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ESI4_9BACT rbh
recombination factor protein RarA; K07478 putative ATPase Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein
rifoxya1_sub10_scaffold_63_18
GWB2_WWE3_43_22_part, WWE3, Bacteria

Not on your lists

comp(18034..19296)
DNA (1263bp) protein (421aa)
Nucleotidyltransferase/DNA polymerase involved in DNA repair n=2 Tax=Bacteria RepID=V5RTM9_9BACT rbh
Nucleotidyltransferase/DNA polymerase involved in DNA repair {ECO:0000313|EMBL:KKT11994.1}; TaxID=1619118 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011
Nucleotidyltransferase/DNA polymerase involved in DNA repair
rifoxya1_sub10_scaffold_63_19
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

comp(19280..19540)
DNA (261bp) protein (87aa)
hypothetical protein Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein
hypothetical protein alias=ACD13_214869.3548.7G0005,ACD13_214869.3548.7_5,ACD13_C00065G00005 id=7391 tax=ACD13 species=OP11 genus=unknown taxon_order=unknown taxon_class=unknown phylum=OP11 organism_group=OP11 organism_desc=OP11
rifoxya1_sub10_scaffold_63_20
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

19684..20037
DNA (354bp) protein (118aa)
coiled-coil 5..36 Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein
coiled-coil 5..36 alias=ACD13_214869.3548.7G0006,ACD13_214869.3548.7_6,ACD13_C00065G00006 id=7392 tax=ACD13 species=OP11 genus=unknown taxon_order=unknown taxon_class=unknown phylum=OP11 organism_group=OP11 organism_desc=OP11
rifoxya1_sub10_scaffold_63_21
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

comp(20100..20816)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus RepID=H3JL24_STRPU alias=RAAC2_WWE3_C00001G00261,RAAC2_WWE3_261 id=725308 tax=RAAC2_WWE3 species=Strongylocentrotus purpuratus genus=Strongylocentrotus taxon_order=Echinoida taxon_class=Echinoidea phylum=Echinodermata organism_group=WWE3 rbh
uncharacterized LOC576576 Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein
rifoxya1_sub10_scaffold_63_22
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

comp(20863..22068)
DNA (1206bp) protein (402aa)
Copper amine oxidase-like protein n=2 Tax=Bacteria RepID=V5RS43_9BACT rbh
copper amine oxidase family protein Tax=RIFOXYD2_FULL_WWE3_43_10_curated
Copper amine oxidase-like protein
rifoxya1_sub10_scaffold_63_23
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

22115..22945
DNA (831bp) protein (277aa)
Uncharacterized protein Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein
seg 21..36 alias=RAAC2_WWE3_C00001G00259,RAAC2_WWE3_259 id=725306 tax=RAAC2_WWE3 organism_group=WWE3
Displaying 23 items

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