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rifoxya1_sub10_scaffold_80

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxya1_sub10_scaffold_80_1
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

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3..1178
DNA (1176bp) protein (392aa)
radical SAM domain-containing protein; K06871 uncharacterized protein Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein
radical SAM domain-containing protein; K06871 uncharacterized protein alias=RAAC2_WWE3_393,RAAC2_WWE3_C00001G00393 id=725440 tax=RAAC2_WWE3 species=Roseiflexus sp. RS-1 genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi organism_group=WWE3 rbh
rifoxya1_sub10_scaffold_80_2
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

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1203..1331
DNA (129bp) protein (43aa)
Tax=RIFOXYD2_FULL_WWE3_43_10_curated
rifoxya1_sub10_scaffold_80_3
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

1480..2301
DNA (822bp) protein (274aa)
hypothetical protein Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein
hypothetical protein alias=RAAC2_WWE3_394,RAAC2_WWE3_C00001G00394 id=725441 tax=RAAC2_WWE3 organism_group=WWE3
rifoxya1_sub10_scaffold_80_4
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

2403..2672
DNA (270bp) protein (90aa)
hypothetical protein Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein
hypothetical protein alias=RAAC2_WWE3_402,RAAC2_WWE3_C00001G00402 id=725449 tax=RAAC2_WWE3 organism_group=WWE3
rifoxya1_sub10_scaffold_80_5
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

2679..2927
DNA (249bp) protein (83aa)
RelE-like 1..80 Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein
RelE-like 1..80 alias=RAAC2_WWE3_403,RAAC2_WWE3_C00001G00403 id=725450 tax=RAAC2_WWE3 organism_group=WWE3
rifoxya1_sub10_scaffold_80_6
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

2987..4261
DNA (1275bp) protein (425aa)
Major facilitator superfamily MFS_1 n=6 Tax=Pelosinus fermentans RepID=I8RHL7_9FIRM alias=RAAC2_WWE3_404,RAAC2_WWE3_C00001G00404 id=725451 tax=RAAC2_WWE3 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes organism_group=WWE3 rbh
Major facilitator superfamily MFS_1 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
Major facilitator superfamily MFS_1
rifoxya1_sub10_scaffold_80_7
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

4310..4798
DNA (489bp) protein (163aa)
tig; trigger factor; K03545 trigger factor Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein
tig; trigger factor; K03545 trigger factor alias=RAAC2_WWE3_407,RAAC2_WWE3_C00001G00407 id=725454 tax=RAAC2_WWE3 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=WWE3
rifoxya1_sub10_scaffold_80_8
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

4770..5153
DNA (384bp) protein (128aa)
tig; trigger factor; K03545 trigger factor Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein
tig; trigger factor; K03545 trigger factor alias=RAAC2_WWE3_407,RAAC2_WWE3_C00001G00407 id=725454 tax=RAAC2_WWE3 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=WWE3
rifoxya1_sub10_scaffold_80_9
GWB2_WWE3_43_22_part, WWE3, Bacteria

Not on your lists

5140..5751
DNA (612bp) protein (204aa)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=candidate division WWE3 bacterium RAAC2_WWE3_1 RepID=V5RT59_9BACT rbh
ATP-dependent Clp protease proteolytic subunit {ECO:0000313|EMBL:KKT09845.1}; TaxID=1619118 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWB2_43_22.;"
ATP-dependent Clp protease proteolytic subunit
rifoxya1_sub10_scaffold_80_10
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

5984..6871
DNA (888bp) protein (296aa)
hypothetical protein Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein alias=ACD24_3537.2077.7G0001,ACD24_3537.2077.7_1,ACD24_C00150G00001 id=28425 tax=ACD24 species=WWE3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=WWE3 organism_desc=WWE3
rifoxya1_sub10_scaffold_80_11
GWB2_WWE3_43_22_part, WWE3, Bacteria

Not on your lists

6926..7627
DNA (702bp) protein (234aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT09847.1}; TaxID=1619118 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWB2_43_22.;"
hypothetical protein alias=ACD24_3537.2077.7G0002,ACD24_3537.2077.7_2,ACD24_C00150G00002 id=28426 tax=ACD24 species=WWE3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=WWE3 organism_desc=WWE3 rbh
rifoxya1_sub10_scaffold_80_12
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

comp(7595..10129)
DNA (2535bp) protein (845aa)
Uncharacterized protein n=1 Tax=candidate division WWE3 bacterium RAAC2_WWE3_1 RepID=V5RUY5_9BACT rbh
P-type ATPase, translocating Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein
rifoxya1_sub10_scaffold_80_13
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

10236..10610
DNA (375bp) protein (125aa)
Mannose-6-phosphate isomerase Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein alias=ACD24_C00018G00002,ACD24_1695.2143.7G0002,ACD24_1695.2143.7_2 id=27599 tax=ACD24 species=unknown genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota organism_group=WWE3 organism_desc=WWE3
hypothetical protein
rifoxya1_sub10_scaffold_80_14
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

10664..11551
DNA (888bp) protein (296aa)
transmembrane_regions 10..32 Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein
transmembrane_regions 10..32 alias=ACD24_194447.4507.8G0001,ACD24_194447.4507.8_1,ACD24_C00075G00001 id=27981 tax=ACD24 species=WWE3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=WWE3 organism_desc=WWE3 rbh
rifoxya1_sub10_scaffold_80_15
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

comp(11514..12197)
DNA (684bp) protein (228aa)
tRNA pseudouridine synthase B (EC:5.4.99.-); K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=RIFOXYD2_FULL_WWE3_43_10_curated
Uncharacterized protein n=1 Tax=candidate division WWE3 bacterium RAAC2_WWE3_1 RepID=V5RT61_9BACT rbh
hypothetical protein
rifoxya1_sub10_scaffold_80_16
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

12271..14094
DNA (1824bp) protein (608aa)
threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=RIFOXYC1_FULL_WWE3_42_17_curated
Uncharacterized protein n=1 Tax=candidate division WWE3 bacterium RAAC2_WWE3_1 RepID=V5RSR7_9BACT rbh
hypothetical protein
rifoxya1_sub10_scaffold_80_17
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

14172..14630
DNA (459bp) protein (153aa)
Translation initiation factor IF-3 n=1 Tax=candidate division WWE3 bacterium RAAC2_WWE3_1 RepID=V5RUZ0_9BACT
translation initiation factor 3 (bIF-3); K02520 translation initiation factor IF-3 Tax=RIFOXYD2_FULL_WWE3_43_10_curated
Translation initiation factor IF-3
rifoxya1_sub10_scaffold_80_18
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists


14869..15219
DNA (351bp) protein (117aa)
50S ribosomal protein L20 n=1 Tax=Stomatobaculum longum RepID=H1HRN1_9FIRM alias=RAAC2_WWE3_417,RAAC2_WWE3_C00001G00417 id=725464 tax=RAAC2_WWE3 organism_group=WWE3
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 Tax=RIFOXYD2_FULL_WWE3_43_10_curated
50S ribosomal protein L20
rifoxya1_sub10_scaffold_80_19
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

15239..17071
DNA (1833bp) protein (611aa)
UniRef90_D9PHK9 ABC transporter, ATP-binding/permease protein n=1 Tax=sediment metagenome RepID=D9PHK9_9ZZZZ alias=RAAC2_WWE3_418,RAAC2_WWE3_C00001G00418 id=725465 tax=RAAC2_WWE3 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=WWE3 rbh
xenobiotic-transporting ATPase; K06147 ATP-binding cassette, subfamily B, bacterial Tax=RIFOXYD2_FULL_WWE3_43_10_curated
ABC transporter, ATP-binding/permease protein
rifoxya1_sub10_scaffold_80_20
GWE1_WWE3_41_27, WWE3, Bacteria

Not on your lists

comp(17068..18930)
DNA (1863bp) protein (621aa)
cob:COB47_1273 phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] alias=RAAC2_WWE3_419,RAAC2_WWE3_C00001G00419 id=725466 tax=RAAC2_WWE3 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=WWE3 rbh
Phenylalanine-tRNA ligase beta subunit {ECO:0000313|EMBL:KKS07766.1}; TaxID=1619131 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWE1_41_27.;"
hypothetical protein
rifoxya1_sub10_scaffold_80_21
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists


comp(18932..19966)
DNA (1035bp) protein (345aa)
phenylalanyl-tRNA synthetase, alpha subunit (EC:6.1.1.20) Tax=RIFOXYD2_FULL_WWE3_43_10_curated
chd:Calhy_1443 phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] alias=RAAC2_WWE3_420,RAAC2_WWE3_C00001G00420 id=725467 tax=RAAC2_WWE3 species=Caloramator australicus genus=Caloramator taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=WWE3 rbh
hypothetical protein
rifoxya1_sub10_scaffold_80_22
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

comp(20028..22739)
DNA (2712bp) protein (904aa)
putative penicillin-binding protein Tax=RIFOXYD2_FULL_WWE3_43_10_curated
cap:CLDAP_37440 putative penicillin-binding protein alias=RAAC2_WWE3_421,RAAC2_WWE3_C00001G00421 id=725468 tax=RAAC2_WWE3 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi organism_group=WWE3 rbh
hypothetical protein
rifoxya1_sub10_scaffold_80_23
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

22846..23109
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E800_9BACT
Uncharacterized protein Tax=RIFOXYD2_FULL_WWE3_43_10_curated
rifoxya1_sub10_scaffold_80_24
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

23425..23673
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=uncultured bacterium PF8_9BACT">RepID=K2CPF8_9BACT
hypothetical protein Tax=RIFOXYD2_FULL_WWE3_43_10_curated
hypothetical protein
rifoxya1_sub10_scaffold_80_25
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

23774..24772
DNA (999bp) protein (333aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1); K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] Tax=RIFOXYD2_FULL_WWE3_43_10_curated
Uncharacterized protein n=1 Tax=candidate division WWE3 bacterium RAAC2_WWE3_1 RepID=V5RT71_9BACT rbh
hypothetical protein
Displaying 25 items

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