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rifoxya1_sub10_scaffold_6

Search features with annotation key words

Displaying items 1-30 of 178 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxya1_sub10_scaffold_6_1
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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comp(3..230)
DNA (228bp) protein (76aa)
hypothetical protein Tax=RBG_16_Pacearchaeota_35_8_curated
rifoxya1_sub10_scaffold_6_2

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comp(232..639)
DNA (408bp) protein (136aa)
Marine sediment metagenome DNA, contig: S03H2_S09627 {ECO:0000313|EMBL:GAH73722.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifoxya1_sub10_scaffold_6_3
unknown

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comp(640..987)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TTB9_METAC Tax=AR20
hypothetical protein
hypothetical protein alias=gwa2_scaffold_111_69 id=5041504 tax=GW2011_AR20 species=Methanosarcina acetivorans genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota organism_desc=DELETE: see complete genome
rifoxya1_sub10_scaffold_6_4

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comp(984..1268)
DNA (285bp) protein (95aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL71510.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
hypothetical protein alias=gwa2_scaffold_111_68 id=5041503 tax=GW2011_AR20 species=Methanococcus maripaludis genus=Methanococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota organism_desc=DELETE: see complete genome
rifoxya1_sub10_scaffold_6_5

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comp(1333..2679)
DNA (1347bp) protein (449aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003820EA3 rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO55233.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
RNA-metabolising metallo-beta-lactamase
rifoxya1_sub10_scaffold_6_6
AR13, Pacearchaeaota, DPANN, Archaea

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2756..2956
DNA (201bp) protein (67aa)
Tax=AR13
rifoxya1_sub10_scaffold_6_7
unknown

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3004..3378
DNA (375bp) protein (125aa)

This feature has no annotations

rifoxya1_sub10_scaffold_6_8

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3452..4171
DNA (720bp) protein (240aa)
Proteasome alpha subunit {ECO:0000313|EMBL:KHO55226.1}; EC=3.4.25.1 {ECO:0000313|EMBL:KHO55226.1};; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] alias=gwa2_scaffold_111_111 id=5041546 tax=GW2011_AR20 species=unknown genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota organism_desc=DELETE: see complete genome
Proteasome subunit alpha
rifoxya1_sub10_scaffold_6_9
unknown

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4173..4565
DNA (393bp) protein (131aa)

This feature has no annotations

rifoxya1_sub10_scaffold_6_10
AR19, Pacearchaeaota, DPANN, Archaea

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4558..5229
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=1 Tax=Acidilobus saccharovorans (strain DSM 16705 / VKM B-2471 / 345-15) RepID=D9Q2K7_ACIS3
Shwachman-Bodian-diamond syndrome protein; K14574 ribosome maturation protein SDO1 Tax=AR19
ribosome maturation protein SBDS
rifoxya1_sub10_scaffold_6_11
unknown

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5226..5408
DNA (183bp) protein (61aa)

This feature has no annotations

rifoxya1_sub10_scaffold_6_12
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

5439..6113
DNA (675bp) protein (225aa)
rpr43; exosome RNA binding protein (EC:3.1.13.-); K03679 exosome complex component RRP4 Tax=RBG_13_Pacearchaeota_33_26_curated
putative exosome complex RNA-binding protein 1
putative exosome complex RNA-binding protein 1; K03679 exosome complex component RRP4 alias=gwa2_scaffold_111_113 id=5041548 tax=GW2011_AR20 species=Thermococcus kodakarensis genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota organism_desc=DELETE: see complete genome
rifoxya1_sub10_scaffold_6_13
AR1, Pacearchaeaota, DPANN, Archaea

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6110..6805
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036BC30A
hypothetical protein Tax=AR1
exosome complex exonuclease Rrp41
rifoxya1_sub10_scaffold_6_14
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

6805..7614
DNA (810bp) protein (270aa)
exosome complex exonuclease 2; K12589 exosome complex component RRP42 Tax=RBG_13_Pacearchaeota_33_26_curated
Ribosomal RNA-processing protein RRP42
Ribosomal RNA-processing protein RRP42 alias=gwa2_scaffold_111_115 id=5041550 tax=GW2011_AR20 species=unknown genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota organism_desc=DELETE: see complete genome
rifoxya1_sub10_scaffold_6_15
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

7616..7993
DNA (378bp) protein (126aa)
DNA-directed RNA polymerase subunit K; K03055 DNA-directed RNA polymerase subunit K [EC:2.7.7.6] Tax=RBG_16_Pacearchaeota_35_8_curated
DNA-directed RNA polymerase subunit K; K03055 DNA-directed RNA polymerase subunit K [EC:2.7.7.6] alias=gwa2_scaffold_1256_59 id=5045738 tax=GW2011_AR18 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_desc=gwa2_.30_20c
hypothetical protein
rifoxya1_sub10_scaffold_6_16

Not on your lists

comp(7977..9017)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037620E7 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN45002.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RNA-directed DNA polymerase Reverse transcriptase
rifoxya1_sub10_scaffold_6_17

Not on your lists

comp(9347..10042)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000361F1EA
rifoxya1_sub10_scaffold_6_18
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(10113..10385)
DNA (273bp) protein (91aa)
hypothetical protein Tax=CG_Micra_03
hypothetical protein alias=gwa2_scaffold_5961_38 id=5050814 tax=GW2011_AR10 species=Methanocaldococcus jannaschii genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota organism_desc=gwa2_.44_58 (temp)
hypothetical protein
rifoxya1_sub10_scaffold_6_19
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(10386..10649)
DNA (264bp) protein (88aa)
hypothetical protein Tax=CG_Pacearch_02
hypothetical protein
hypothetical protein alias=gwa2_scaffold_1831_53 id=5047024 tax=GW2011_AR10 species=Methanothermococcus okinawensis genus=Methanothermococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota organism_desc=gwa2_.44_58 (temp)
rifoxya1_sub10_scaffold_6_20
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

10739..11899
DNA (1161bp) protein (387aa)
enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] Tax=RBG_13_Pacearchaeota_33_26_curated
enolase (EC:4.2.1.11)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035E3B39
rifoxya1_sub10_scaffold_6_21
unknown

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comp(11896..12186)
DNA (291bp) protein (97aa)

This feature has no annotations

rifoxya1_sub10_scaffold_6_22
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(12378..12692)
DNA (315bp) protein (105aa)
Tax=AR13
rifoxya1_sub10_scaffold_6_23
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


12794..13732
DNA (939bp) protein (313aa)
30S ribosomal protein S2P; K02967 small subunit ribosomal protein S2 Tax=RBG_16_Pacearchaeota_35_8_curated
30S ribosomal protein S2
30S ribosomal protein S2 alias=gwa2_scaffold_32_61 id=5039929 tax=GW2011_AR20 species=Nanoarchaeum equitans genus=Nanoarchaeum taxon_order=unknown taxon_class=unknown phylum=Nanoarchaeota organism_desc=DELETE: see complete genome
rifoxya1_sub10_scaffold_6_24

Not on your lists

comp(13762..14127)
DNA (366bp) protein (122aa)
DNA ligase D, 3'-phosphoesterase domain protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAR9_METMS
Uncharacterized protein {ECO:0000313|EMBL:KHO46928.1}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
DNA ligase D, 3'-phosphoesterase domain protein
rifoxya1_sub10_scaffold_6_25
unknown

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14177..14431
DNA (255bp) protein (85aa)

This feature has no annotations

rifoxya1_sub10_scaffold_6_26
unknown

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14478..14927
DNA (450bp) protein (150aa)

This feature has no annotations

rifoxya1_sub10_scaffold_6_16S_1
unknown

Not on your lists

15211..16654
DNA (1444bp)
rifoxya1_sub10_scaffold_6_27
unknown

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16899..17117
DNA (219bp) protein (73aa)

This feature has no annotations

rifoxya1_sub10_scaffold_6_28
unknown

Not on your lists

17533..17628
DNA (96bp) protein (32aa)

This feature has no annotations

rifoxya1_sub10_scaffold_6_29
R_RIF_OD1_06_37_25b, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

19287..19784
DNA (498bp) protein (166aa)
Homing endonuclease I-ApeII n=2 Tax=Crenarchaeota RepID=H5SVX5_9CREN
Homing endonuclease LAGLIDADG/HNH Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_37_25b_curated
homing endonuclease I-ApeII
Displaying items 1-30 of 178 in total

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