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rifoxya1_full_scaffold_2072

Search features with annotation key words

Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxya1_full_scaffold_2072_1
unknown

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1..129
DNA (129bp) protein (43aa)

This feature has no annotations

rifoxya1_full_scaffold_2072_2
RLO_WOR_2_51_8, WOR-2, Bacteria

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131..1873
DNA (1743bp) protein (581aa)
Putative uncharacterized protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SLQ1_9BACT
nitrogen-fixing NifU domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_8_curated
rifoxya1_full_scaffold_2072_3

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1906..2196
DNA (291bp) protein (97aa)
Iron-sulfur cluster insertion protein erpA {ECO:0000313|EMBL:KHO55438.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
hypothetical protein
hypothetical protein alias=RAAC2_WWE3_C00001G00744,RAAC2_WWE3_744 id=725791 tax=RAAC2_WWE3 species=Brachyspira pilosicoli genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes organism_group=WWE3
rifoxya1_full_scaffold_2072_4

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comp(2257..2424)
DNA (168bp) protein (56aa)
glutaredoxin n=1 Tax=Anaerophaga thermohalophila RepID=UPI0002D58EBA
Glutaredoxin-like protein, YruB-family {ECO:0000313|EMBL:KKS37886.1}; TaxID=1618820 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_14.;"
glutaredoxin-like protein
rifoxya1_full_scaffold_2072_5

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2534..3958
DNA (1425bp) protein (475aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LHJ2_ACEWD
Uncharacterized protein {ECO:0000313|EMBL:KKO02677.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rifoxya1_full_scaffold_2072_6
unknown

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4071..4514
DNA (444bp) protein (148aa)

This feature has no annotations

rifoxya1_full_scaffold_2072_7
CG_Pacearch_04, Pacearchaeota, Archaea

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comp(4515..5903)
DNA (1389bp) protein (463aa)
Putative PmbA like protein n=1 Tax=Pyrococcus sp. ST04 RepID=I3REF4_9EURY rbh
hypothetical protein; K03592 PmbA protein Tax=CG_Pacearch_04
PmbA like protein
rifoxya1_full_scaffold_2072_8
CG_Pacearch_04, Pacearchaeota, Archaea

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comp(5900..7315)
DNA (1416bp) protein (472aa)
Zinc-dependent protease, TldD/PmbA family n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AIM9_PYRYC
hypothetical protein; K03568 TldD protein Tax=CG_Pacearch_04
TldD/PmbA family zinc-dependent protease
rifoxya1_full_scaffold_2072_9

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7358..8008
DNA (651bp) protein (217aa)
Protein hit n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G819_9FIRM
Hit-like protein involved in cell-cycle regulation {ECO:0000313|EMBL:KHO52407.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
histidine triad (HIT) protein
rifoxya1_full_scaffold_2072_10

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comp(7983..8846)
DNA (864bp) protein (288aa)
Uncharacterized protein {ECO:0000313|EMBL:AIF00785.1}; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_139_C07.;"
Peptidase A24A prepilin type IV alias=AR15_final_v5_1034 id=5800557 tax=GW2011_AR15 species=Candidatus Parvarchaeum acidophilus genus=Candidatus Parvarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota
Peptidase A24A prepilin type IV
rifoxya1_full_scaffold_2072_11

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comp(8854..9825)
DNA (972bp) protein (324aa)
DNA repair and recombination protein RadA {ECO:0000313|EMBL:CEG14029.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
DNA repair and recombination protein RadA alias=gwa2_scaffold_241_19 id=5043016 tax=GW2011_AR5 species=Thermococcus barophilus genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota organism_desc=gwa2_.48_18
DNA repair and recombination protein RadA
rifoxya1_full_scaffold_2072_12
AR4, Woesearchaeaota, DPANN, Archaea

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comp(9818..10825)
DNA (1008bp) protein (336aa)
replication factor A; K07466 replication factor A1 Tax=AR4
Putative uncharacterized protein PH1893 alias=gwa2_scaffold_2554_19 id=5048360 tax=GW2011_AR4 species=Pyrococcus horikoshii genus=Pyrococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota organism_desc=gwa2_.45_18
Nucleic acid binding OB-fold tRNA/helicase-type
rifoxya1_full_scaffold_2072_13
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(10929..12266)
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E4370
nucleotidyltransferase; K06915 Tax=CG_Woesearch_01
hypothetical protein
rifoxya1_full_scaffold_2072_14
unknown

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comp(12610..13398)
DNA (789bp) protein (263aa)

This feature has no annotations

rifoxya1_full_scaffold_2072_15
unknown

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13509..14225
DNA (717bp) protein (239aa)

This feature has no annotations

rifoxya1_full_scaffold_2072_16
CG_CP01_01, CG_CP01, Bacteria

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14313..15098
DNA (786bp) protein (262aa)
peptidase M48, Ste24p; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=CG_CP01_01
Protease HtpX homolog n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M6S5_GEODF
peptidase M48 Ste24p
rifoxya1_full_scaffold_2072_17
unknown

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15318..15953
DNA (636bp) protein (212aa)

This feature has no annotations

rifoxya1_full_scaffold_2072_18
unknown

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15986..16657
DNA (672bp) protein (224aa)

This feature has no annotations

rifoxya1_full_scaffold_2072_19
CG_Pacearch_05, Pacearchaeota, Archaea

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16650..17021
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Microgenomates bacterium SCGC AAA040-P11 RepID=UPI00036030FD
metallopeptidase-like protein Tax=CG_Pacearch_05
hypothetical protein
rifoxya1_full_scaffold_2072_20

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17082..17429
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000363D148
Translation initiation factor 1A {ECO:0000313|EMBL:KHO51640.1}; Flags: Fragment;; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Translation initiation factor 1A
rifoxya1_full_scaffold_2072_21
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists


17429..17977
DNA (549bp) protein (183aa)
KH domain protein; K06961 ribosomal RNA assembly protein Tax=AR4
KH domain protein; K06961 ribosomal RNA assembly protein alias=gwa2_scaffold_135_179 id=5041915 tax=GW2011_AR4 species=Methanocaldococcus infernus genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota organism_desc=gwa2_.45_18
KH domain protein
rifoxya1_full_scaffold_2072_22
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

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17967..18614
DNA (648bp) protein (216aa)
Type 2 DNA topoisomerase 6 subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00322};; Type II DNA topoisomerase VI subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; TaxID=
DNA topoisomerase VI, B subunit (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit B n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IC28_ACIB4
Displaying 22 items

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