ggKbase home page

rifoxya1_full_scaffold_5162

Search features with annotation key words

Displaying 13 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxya1_full_scaffold_5162_1

Not on your lists

110..3190
DNA (3081bp) protein (1027aa)
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine-tRNA ligase {ECO:0000313|EMBL:AJF61934.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Isoleucine--tRNA ligase alias=AR15_final_v5_1080 id=5800603 tax=GW2011_AR15 species=Thermococcus litoralis genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota
rifoxya1_full_scaffold_5162_2
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

3256..3885
DNA (630bp) protein (210aa)
TATA-box-binding protein Tax=AR15
TATA-box-binding protein alias=AR15_final_v5_555 id=5800078 tax=GW2011_AR15 species=Candidatus Nanosalinarum sp. J07AB56 genus=Candidatus Nanosalinarum taxon_order=unknown taxon_class=Nanohaloarchaea phylum=Euryarchaeota
TATA-box-binding protein
rifoxya1_full_scaffold_5162_3

Not on your lists

3886..4329
DNA (444bp) protein (148aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO47909.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
seg alias=gwa2_scaffold_117_58 id=5041657 tax=GW2011_AR4 organism_desc=gwa2_.45_18
rifoxya1_full_scaffold_5162_4
Halanaerobium praevalens, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4318..4797)
DNA (480bp) protein (160aa)
Membrane-bound metal-dependent hydrolase n=1 Tax=Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL) RepID=E3DR59_HALPG
Membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:ADO76965.1}; Flags: Precursor;; TaxID=572479 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" s
membrane-bound metal-dependent hydrolase
rifoxya1_full_scaffold_5162_5
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(4878..5174)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003675C17
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein
rifoxya1_full_scaffold_5162_6
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5210..5695)
DNA (486bp) protein (162aa)
Arginase Tax=AR15
Arginase alias=AR15_final_v5_76 id=5799599 tax=GW2011_AR15 species=Thermococcus litoralis genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota
Arginase
rifoxya1_full_scaffold_5162_7
unknown

Not on your lists

comp(5649..5771)
DNA (123bp) protein (41aa)

This feature has no annotations

rifoxya1_full_scaffold_5162_8
unknown

Not on your lists

5816..6172
DNA (357bp) protein (119aa)

This feature has no annotations

rifoxya1_full_scaffold_5162_9
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

6246..6860
DNA (615bp) protein (205aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547};
rlmE; Ribosomal RNA large subunit methyltransferase E (EC:2.1.1.166)
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RRP1_METFO
rifoxya1_full_scaffold_5162_10
RBG_16_OP11_39_9b_curated, Microgenomates, Bacteria

Not on your lists

comp(6832..7389)
DNA (558bp) protein (186aa)
MgtE integral membrane region n=1 Tax=Natronorubrum tibetense GA33 RepID=L9WEU9_9EURY
Cation transporter Tax=RBG_16_OP11_39_9b_curated
mgtE-like transporter
rifoxya1_full_scaffold_5162_11

Not on your lists

comp(7386..7919)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. MB1 RepID=U6EE73_9EURY
Marine sediment metagenome DNA, contig: S01H4_L04093 {ECO:0000313|EMBL:GAG81697.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
rifoxya1_full_scaffold_5162_12
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(7965..8630)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000365774B
hypothetical protein
Tax=AR18
rifoxya1_full_scaffold_5162_13

Not on your lists

comp(8630..10753)
DNA (2124bp) protein (708aa)
DNA replication initiator protein, replicative DNA helicase Mcm {ECO:0000313|EMBL:KHO46116.1}; EC=3.6.4.- {ECO:0000313|EMBL:KHO46116.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037CD2F5
DNA replication initiator Cdc21/Cdc54
Displaying 13 items

View Taxonomy