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rifoxya2_full_scaffold_130

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxya2_full_scaffold_130_1
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(1..246)
DNA (246bp) protein (82aa)
Putative uncharacterized protein id=4990852 bin=GWA2_Elusi_like_61_42 species=Spirosoma linguale genus=Spirosoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
rifoxya2_full_scaffold_130_2
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(455..3121)
DNA (2667bp) protein (889aa)
putative membrane-anchored cell surface protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Putative uncharacterized protein A540L id=2188105 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=Chlorovirus taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
putative membrane-anchored cell surface protein
rifoxya2_full_scaffold_130_3
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(3306..4889)
DNA (1584bp) protein (528aa)
Outer membrane autotransporter Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Outer membrane autotransporter id=4887359 bin=GWA2_Elusimicrobia_51_34 species=Cyanophage Syn30 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
rifoxya2_full_scaffold_130_4
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(5144..6226)
DNA (1083bp) protein (361aa)
Putative uncharacterized protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Putative uncharacterized protein id=4732924 bin=GWC2_Elusimicrobia_51_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia rbh
rifoxya2_full_scaffold_130_5
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

6488..7201
DNA (714bp) protein (238aa)
DNA-binding response regulator Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Phosphate regulon response regulator PhoB id=4990848 bin=GWA2_Elusi_like_61_42 species=unknown genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
DNA-binding response regulator
rifoxya2_full_scaffold_130_6
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

7243..7617
DNA (375bp) protein (125aa)
two component transcriptional regulator; K07662 two-component system, OmpR family, response regulator CpxR Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Transcriptional regulator id=2188102 bin=GWA2_Elusimicrobia_56_46 species=Clostridium saccharoperbutylacetonicum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
two component transcriptional regulator
rifoxya2_full_scaffold_130_7
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

7649..7900
DNA (252bp) protein (84aa)
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
hypothetical protein id=2188101 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
rifoxya2_full_scaffold_130_8
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

7921..8406
DNA (486bp) protein (162aa)
cAMP-binding protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Cyclic nucleotide-binding domain protein id=2188100 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
cAMP-binding protein
rifoxya2_full_scaffold_130_9
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

8426..9502
DNA (1077bp) protein (359aa)
hypothetical protein; K03548 putative permease Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Putative uncharacterized protein id=2188099 bin=GWA2_Elusimicrobia_56_46 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
hypothetical protein
rifoxya2_full_scaffold_130_10
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(9560..9940)
DNA (381bp) protein (127aa)
histidine kinase Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Response regulator id=2308388 bin=GWB2_Elusimicrobium_63_22 species=[Clostridium] difficile genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
histidine kinase
rifoxya2_full_scaffold_130_11
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(10285..10992)
DNA (708bp) protein (236aa)
sporulation polysaccharide deacetylase PdaB Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Putative xylanase/chitin deacetylase id=2188098 bin=GWA2_Elusimicrobia_56_46 species=Moorea producens genus=Moorea taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
sporulation polysaccharide deacetylase PdaB
rifoxya2_full_scaffold_130_12
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(10982..12649)
DNA (1668bp) protein (556aa)
hypothetical protein; K01992 ABC-2 type transport system permease protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Putative uncharacterized protein id=2188097 bin=GWA2_Elusimicrobia_56_46 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
hypothetical protein
rifoxya2_full_scaffold_130_13
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(12674..13426)
DNA (753bp) protein (251aa)
hypothetical protein; K01990 ABC-2 type transport system ATP-binding protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Sulfate-transporting ATPase id=2188096 bin=GWA2_Elusimicrobia_56_46 species=Syntrophobotulus glycolicus genus=Syntrophobotulus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
ABC transporter
rifoxya2_full_scaffold_130_14
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(13459..14154)
DNA (696bp) protein (232aa)
hypothetical protein; K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
PpiC-type peptidyl-prolyl cis-trans isomerase id=2188095 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
hypothetical protein
rifoxya2_full_scaffold_130_15
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(14156..14554)
DNA (399bp) protein (133aa)
Integral membrane protein CcmA Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Integral membrane protein CcmA involved in cell shape determination id=2188094 bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
Integral membrane protein CcmA
rifoxya2_full_scaffold_130_16
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(14621..15589)
DNA (969bp) protein (323aa)
metalloendopeptidase-like membrane protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Metalloendopeptidase-like membrane protein id=2188093 bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
metalloendopeptidase-like membrane protein
rifoxya2_full_scaffold_130_17
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(15624..16505)
DNA (882bp) protein (294aa)
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
hypothetical protein id=2188092 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
rifoxya2_full_scaffold_130_18
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(17084..18400)
DNA (1317bp) protein (439aa)
tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Tyrosyl-tRNA synthetase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDM2_9CHLR
tyrosyl-tRNA synthetase
rifoxya2_full_scaffold_130_19
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(18503..19327)
DNA (825bp) protein (275aa)
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Putative uncharacterized protein id=4857198 bin=GWA2_Elusimicrobia_56_46 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
rifoxya2_full_scaffold_130_20
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(19321..20364)
DNA (1044bp) protein (348aa)
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Putative uncharacterized protein id=4857197 bin=GWA2_Elusimicrobia_56_46 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
hypothetical protein
rifoxya2_full_scaffold_130_21
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(20660..22357)
DNA (1698bp) protein (566aa)
resolvase domain-containing protein; K06400 site-specific DNA recombinase Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Resolvase domain protein id=1718549 bin=GWA2_Elusimicrobia_66_18 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum rbh
resolvase domain-containing protein
rifoxya2_full_scaffold_130_22
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(22643..23734)
DNA (1092bp) protein (364aa)
Marine sediment metagenome DNA, contig: S01H1_L00458 Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
rifoxya2_full_scaffold_130_23
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(23727..24833)
DNA (1107bp) protein (369aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
rifoxya2_full_scaffold_130_24
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(24901..26160)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6D9T5_9BACI
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
hypothetical protein
rifoxya2_full_scaffold_130_25
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

26471..27052
DNA (582bp) protein (194aa)
RNA polymerase sigma factor, sigma-70 family Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
id=4202779 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RNA polymerase sigma factor, sigma-70 family, ECF subfamily
rifoxya2_full_scaffold_130_26
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

27108..27398
DNA (291bp) protein (97aa)
Putative uncharacterized protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Putative uncharacterized protein id=4202780 bin=GWF2_OP3_43_52 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
rifoxya2_full_scaffold_130_27
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

27385..28164
DNA (780bp) protein (260aa)
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
hypothetical protein id=4675853 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
rifoxya2_full_scaffold_130_28
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

28198..28971
DNA (774bp) protein (258aa)
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
hypothetical protein id=4675852 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
rifoxya2_full_scaffold_130_29
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

28968..29426
DNA (459bp) protein (153aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
rifoxya2_full_scaffold_130_30
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

29434..31095
DNA (1662bp) protein (554aa)
helicase n=1 Tax=Wenxinia marina RepID=UPI000375D2F8 rbh
type III restriction enzyme, res subunit Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
type III restriction enzyme, res subunit
Displaying items 1-30 of 72 in total

View Taxonomy