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rifoxya2_full_scaffold_373

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxya2_full_scaffold_373_1
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(35..1009)
DNA (975bp) protein (325aa)
drug/metabolite transporter (DMT) superfamily permease Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Permeases of the drug/metabolite transporter (DMT) superfamily protein id=4815820 bin=GWA2_Elusi_like_61_42 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
drug/metabolite transporter (DMT) superfamily permease
rifoxya2_full_scaffold_373_2
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(1084..2334)
DNA (1251bp) protein (417aa)
aminotransferase; K00819 ornithine--oxo-acid transaminase [EC:2.6.1.13] Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Ornithine--oxo-acid transaminase id=3471758 bin=GWA2_Elusimicrobia_56_46 species=Bacillus bataviensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
aminotransferase
rifoxya2_full_scaffold_373_3
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(2367..3116)
DNA (750bp) protein (250aa)
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Putative uncharacterized protein id=3471753 bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
rifoxya2_full_scaffold_373_4
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

3517..5307
DNA (1791bp) protein (597aa)
radical SAM protein YgiQ Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
UPF0313 protein SinacDRAFT_0860 id=3471746 bin=GWA2_Elusimicrobia_56_46 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
radical SAM protein YgiQ
rifoxya2_full_scaffold_373_5
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(5372..6517)
DNA (1146bp) protein (382aa)
3'-5' exonuclease; K03684 ribonuclease D [EC:3.1.13.5] Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
3'-5' exonuclease id=3471743 bin=GWA2_Elusimicrobia_56_46 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
ribonuclease D
rifoxya2_full_scaffold_373_6
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

6720..7289
DNA (570bp) protein (190aa)
rluE; Pseudouridine synthase Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Pseudouridine synthase id=3471738 bin=GWA2_Elusimicrobia_56_46 species=Thauera linaloolentis genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
rluE; Pseudouridine synthase
rifoxya2_full_scaffold_373_7
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

7337..8230
DNA (894bp) protein (298aa)
3-hydroxyisobutyrate dehydrogenase Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
3-hydroxyisobutyrate dehydrogenase id=3471736 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
3-hydroxyisobutyrate dehydrogenase
rifoxya2_full_scaffold_373_8
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

8231..10192
DNA (1962bp) protein (654aa)
putative Indolepyruvate ferredoxin oxidoreductase; K04759 ferrous iron transport protein B Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Small GTP-binding protein id=3471734 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
putative Indolepyruvate ferredoxin oxidoreductase
rifoxya2_full_scaffold_373_9
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

10231..11433
DNA (1203bp) protein (401aa)
MFS transporter family protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Major facilitator superfamily MFS_1 id=3471525 bin=GWA2_Elusimicrobia_56_46 species=PER_GWE2_38_7 genus=PER_GWE2_38_7 taxon_order=PER_GWE2_38_7 taxon_class=PER_GWE2_38_7 phylum=PER tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
MFS transporter family protein
rifoxya2_full_scaffold_373_10
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

11456..12745
DNA (1290bp) protein (430aa)
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
UPF0597 protein Emin_0811 id=3471521 bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
hypothetical protein
rifoxya2_full_scaffold_373_11
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

12745..13614
DNA (870bp) protein (290aa)
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
hypothetical protein id=3471517 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
rifoxya2_full_scaffold_373_12
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

13834..16368
DNA (2535bp) protein (845aa)
glycoside hydrolase family protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Glycoside hydrolase family 57 id=3471509 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
glycoside hydrolase
rifoxya2_full_scaffold_373_13
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(16447..18075)
DNA (1629bp) protein (543aa)
glycoside hydrolase family protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Glycoside hydrolase family protein id=3471506 bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
glycoside hydrolase family protein
rifoxya2_full_scaffold_373_14
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(18065..18922)
DNA (858bp) protein (286aa)
Rho termination factor domain-containing protein; K09942 hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Putative uncharacterized protein id=3471505 bin=GWA2_Elusimicrobia_56_46 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
Rho termination factor domain-containing protein
rifoxya2_full_scaffold_373_15
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(19190..19972)
DNA (783bp) protein (261aa)
ABC transporter-like protein; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Iron ABC transporter ATP-binding protein id=3471504 bin=GWA2_Elusimicrobia_56_46 species=Paenibacillus dendritiformis genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
ABC transporter-like protein
rifoxya2_full_scaffold_373_16
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(20001..20939)
DNA (939bp) protein (313aa)
Transport system permease Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Transport system permease id=3471503 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
Transport system permease
rifoxya2_full_scaffold_373_17
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(20932..22041)
DNA (1110bp) protein (370aa)
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Periplasmic binding protein id=3471502 bin=GWA2_Elusimicrobia_56_46 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
periplasmic binding protein
rifoxya2_full_scaffold_373_18
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(22020..22847)
DNA (828bp) protein (276aa)
Mrp; ATPase; K03593 ATP-binding protein involved in chromosome partitioning Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
ATPase id=3471496 bin=GWA2_Elusimicrobia_56_46 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
Mrp; ATPase
rifoxya2_full_scaffold_373_19
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(22847..23254)
DNA (408bp) protein (136aa)
hydrogenase expression/synthesis HypA; K04651 hydrogenase nickel incorporation protein HypA/HybF Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Hydrogenase nickel incorporation protein HypA id=3471495 bin=GWA2_Elusimicrobia_56_46 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
hydrogenase expression/synthesis HypA
rifoxya2_full_scaffold_373_20
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(23303..23593)
DNA (291bp) protein (97aa)
hypothetical protein; K09747 hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Putative uncharacterized protein id=4815761 bin=GWA2_Elusi_like_61_42 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
hypothetical protein
rifoxya2_full_scaffold_373_21
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(23607..25103)
DNA (1497bp) protein (499aa)
amino acid permease; K03294 basic amino acid/polyamine antiporter, APA family Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Amino acid permease-associated region id=4815760 bin=GWA2_Elusi_like_61_42 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
amino acid permease
rifoxya2_full_scaffold_373_22
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(25146..25625)
DNA (480bp) protein (160aa)
Ni,Fe-hydrogenase maturation factor; K08315 hydrogenase 3 maturation protease [EC:3.4.23.51] Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Ni,Fe-hydrogenase maturation factor id=3471492 bin=GWA2_Elusimicrobia_56_46 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
Ni,Fe-hydrogenase maturation factor
rifoxya2_full_scaffold_373_23
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(25976..27307)
DNA (1332bp) protein (444aa)
nickel-dependent hydrogenase Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Nickel-dependent hydrogenase id=3471490 bin=GWA2_Elusimicrobia_56_46 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
nickel-dependent hydrogenase
rifoxya2_full_scaffold_373_24
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(27294..28070)
DNA (777bp) protein (259aa)
nickel-dependent hydrogenase, small chain Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Nickel-dependent hydrogenase, small chain id=3471489 bin=GWA2_Elusimicrobia_56_46 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
nickel-dependent hydrogenase, small chain
rifoxya2_full_scaffold_373_25
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(28162..28998)
DNA (837bp) protein (279aa)
oxidoreductase Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
NAD/FAD binding domain, oxidoreductase id=3471488 bin=GWA2_Elusimicrobia_56_46 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
oxidoreductase
rifoxya2_full_scaffold_373_26
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(28995..30029)
DNA (1035bp) protein (345aa)
Ni/Fe hydrogenase subunit beta Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Ni/Fe hydrogenase beta subunit id=3471487 bin=GWA2_Elusimicrobia_56_46 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
Ni/Fe hydrogenase subunit beta
rifoxya2_full_scaffold_373_27
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

30370..30852
DNA (483bp) protein (161aa)
putative phosphohistidine phosphatase SixA; K08296 phosphohistidine phosphatase [EC:3.1.3.-] Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Phosphohistidine phosphatase SixA id=3471486 bin=GWA2_Elusimicrobia_56_46 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
putative phosphohistidine phosphatase SixA
rifoxya2_full_scaffold_373_28
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

30849..32045
DNA (1197bp) protein (399aa)
sporulation protein and related proteins Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
SpoIID/LytB domain protein id=3471288 bin=GWA2_Elusimicrobia_56_46 species=Mitsuokella multacida genus=Mitsuokella taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
sporulation protein and-like proteins
rifoxya2_full_scaffold_373_29
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

32125..32910
DNA (786bp) protein (262aa)
undecaprenyl-diphosphatase (EC:3.6.1.27); K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase id=3471286 bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
rifoxya2_full_scaffold_373_30
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

32958..34031
DNA (1074bp) protein (358aa)
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Putative uncharacterized protein id=3471282 bin=GWA2_Elusimicrobia_56_46 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
hypothetical protein
Displaying items 1-30 of 35 in total

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