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rifoxya2_full_scaffold_480

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxya2_full_scaffold_480_1
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(190..549)
DNA (360bp) protein (120aa)
XRE family transcriptional regulator Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Putative transcriptional regulator id=4985489 bin=GWA2_Elusimicrobia_51_34 species=Pelodictyon luteolum genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
transcriptional regulator
rifoxya2_full_scaffold_480_2
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

908..2860
DNA (1953bp) protein (651aa)
RNAse R (EC:3.1.-.-); K12573 ribonuclease R [EC:3.1.-.-] Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
RNAse R (EC:3.1.-.-)
Ribonuclease R id=2005302 bin=GWA2_Elusimicrobia_56_46 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
rifoxya2_full_scaffold_480_3
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

3147..3302
DNA (156bp) protein (52aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
rifoxya2_full_scaffold_480_4
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

3648..6995
DNA (3348bp) protein (1116aa)
Cell wall surface anchor family protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Cell wall surface anchor family protein id=4894122 bin=GWA2_Elusi-like_A8_64_40 species=Streptococcus sanguinis genus=Streptococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Elusi-like_A8_64_40 organism_group=Elusimicrobia rbh
rifoxya2_full_scaffold_480_5
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

6965..7969
DNA (1005bp) protein (335aa)
low affinity penicillin binding protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Uncharacterized protein id=4163630 bin=GWC2_Elusimicrobia_64_44 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
low affinity penicillin binding protein
rifoxya2_full_scaffold_480_6
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists


8229..9341
DNA (1113bp) protein (371aa)
recA protein (EC:3.6.3.8); K03553 recombination protein RecA Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
recA protein (EC:3.6.3.8)
Protein RecA id=2005142 bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
rifoxya2_full_scaffold_480_7
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

9398..10300
DNA (903bp) protein (301aa)
integrase family protein; K04763 integrase/recombinase XerD Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Tyrosine recombinase XerC id=2005139 bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
integrase family protein
rifoxya2_full_scaffold_480_8
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

10377..11924
DNA (1548bp) protein (516aa)
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Putative uncharacterized protein id=2005136 bin=GWA2_Elusimicrobia_56_46 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
hypothetical protein
rifoxya2_full_scaffold_480_9
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

11984..13093
DNA (1110bp) protein (370aa)
3-hydroxyacyl-CoA dehydrogenase Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
3-hydroxyacyl-CoA dehydrogenase id=2005133 bin=GWA2_Elusimicrobia_56_46 species=Aequorivita sublithincola genus=Aequorivita taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
3-hydroxyacyl-CoA dehydrogenase
rifoxya2_full_scaffold_480_10
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(13253..14113)
DNA (861bp) protein (287aa)
agmatinase; K01480 agmatinase [EC:3.5.3.11] Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Agmatinase id=2005126 bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
agmatinase
rifoxya2_full_scaffold_480_11
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(14181..14729)
DNA (549bp) protein (183aa)
arginine decarboxylase, pyruvoyl-dependent (EC:4.1.1.19); K02626 arginine decarboxylase [EC:4.1.1.19] Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
arginine decarboxylase, pyruvoyl-dependent (EC:4.1.1.19)
Probable pyruvoyl-dependent arginine decarboxylase id=2005123 bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
rifoxya2_full_scaffold_480_12
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(14823..17735)
DNA (2913bp) protein (971aa)
trichohyalin Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Putative uncharacterized protein id=2005120 bin=GWA2_Elusimicrobia_56_46 species=Trichomonas vaginalis genus=Trichomonas taxon_order=Trichomonadida taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
hypothetical protein
rifoxya2_full_scaffold_480_13
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(17836..20961)
DNA (3126bp) protein (1042aa)
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Trichohyalin, putative id=2005116 bin=GWA2_Elusimicrobia_56_46 species=Trichomonas vaginalis genus=Trichomonas taxon_order=Trichomonadida taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
hypothetical protein
rifoxya2_full_scaffold_480_14
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

21600..22232
DNA (633bp) protein (211aa)
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Uncharacterized protein id=5799854 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifoxya2_full_scaffold_480_15
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

22481..22897
DNA (417bp) protein (139aa)
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Putative uncharacterized protein id=5005796 bin=GWA2_Elusi_like_61_42 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
hypothetical protein
rifoxya2_full_scaffold_480_16
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(23139..24551)
DNA (1413bp) protein (471aa)
peptidase M16 domain-containing protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Putative uncharacterized protein id=2005112 bin=GWA2_Elusimicrobia_56_46 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
peptidase M16 domain-containing protein
rifoxya2_full_scaffold_480_17
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(24548..26143)
DNA (1596bp) protein (532aa)
peptidase M16 domain-containing protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Zinc-dependent peptidase, M16 family id=2005108 bin=GWA2_Elusimicrobia_56_46 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
peptidase M16 domain-containing protein
rifoxya2_full_scaffold_480_18
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(26423..27661)
DNA (1239bp) protein (413aa)
diaminopimelate aminotransferase (EC:3.5.1.18); K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
diaminopimelate aminotransferase (EC:3.5.1.18)
Succinyl-diaminopimelate desuccinylase id=4988938 bin=GWA2_Elusimicrobia_56_46 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
rifoxya2_full_scaffold_480_19
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(27762..28328)
DNA (567bp) protein (189aa)
Decarboxylase family protein n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q605U4_METCA
decarboxylase; K06966 Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
decarboxylase
rifoxya2_full_scaffold_480_20
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(28332..29474)
DNA (1143bp) protein (381aa)
putative L-lysine 6-dehydrogenase Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
cap:CLDAP_29660 putative L-lysine 6-dehydrogenase id=717271 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
putative L-lysine 6-dehydrogenase
rifoxya2_full_scaffold_480_21
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

29712..30128
DNA (417bp) protein (139aa)
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
hypothetical protein id=4988927 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
rifoxya2_full_scaffold_480_22
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

30176..31429
DNA (1254bp) protein (418aa)
phospholipase D Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
phospholipase D family protein id=4988926 bin=GWA2_Elusimicrobia_56_46 species=Gluconacetobacter oboediens genus=Gluconacetobacter taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
phospholipase D
Displaying 22 items

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