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rifoxya2_full_scaffold_1140

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxya2_full_scaffold_1140_1
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

3..221
DNA (219bp) protein (73aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
rifoxya2_full_scaffold_1140_2
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(427..768)
DNA (342bp) protein (114aa)
PAS fold domain protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Putative uncharacterized protein id=4818780 bin=GWA2_Elusi-like_A8_64_40 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Elusi-like_A8_64_40 organism_group=Elusimicrobia
PAS fold domain protein
rifoxya2_full_scaffold_1140_3
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

881..1378
DNA (498bp) protein (166aa)
nitroreductase Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Nitroreductase id=3176316 bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
nitroreductase
rifoxya2_full_scaffold_1140_4
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

1375..1779
DNA (405bp) protein (135aa)
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
hypothetical protein id=3176315 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
rifoxya2_full_scaffold_1140_5
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

1776..2477
DNA (702bp) protein (234aa)
Thymidylate synthase Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Thymidylate synthase id=4480053 bin=GWC2_Elusimicrobia_64_44 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
rifoxya2_full_scaffold_1140_6
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

2425..3723
DNA (1299bp) protein (433aa)
dihydroorotase, multifunctional complex type (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
dihydroorotase, multifunctional complex type (EC:3.5.2.3)
Dihydroorotase id=3176314 bin=GWA2_Elusimicrobia_56_46 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
rifoxya2_full_scaffold_1140_7
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

3794..4846
DNA (1053bp) protein (351aa)
pyrD; dihydroorotate dehydrogenase (EC:1.3.3.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
pyrD; dihydroorotate dehydrogenase (EC:1.3.3.1)
Dihydroorotate dehydrogenase (quinone) id=3176313 bin=GWA2_Elusimicrobia_56_46 species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
rifoxya2_full_scaffold_1140_8
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

4863..5540
DNA (678bp) protein (226aa)
Orotidine-5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase id=3176309 bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
rifoxya2_full_scaffold_1140_9
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

5537..6112
DNA (576bp) protein (192aa)
orotate phosphoribosyltransferase; K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Orotate phosphoribosyltransferase id=3176306 bin=GWA2_Elusimicrobia_56_46 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
orotate phosphoribosyltransferase
rifoxya2_full_scaffold_1140_10
unknown

Not on your lists

6227..6517
DNA (291bp) protein (97aa)

This feature has no annotations

rifoxya2_full_scaffold_1140_11
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(7042..7725)
DNA (684bp) protein (228aa)
cytochrome C biogenesis protein, transmembrane region; K06196 cytochrome c-type biogenesis protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Sulfur oxidation V protein, cytochrome c-type biogenesis protein id=3176301 bin=GWA2_Elusimicrobia_56_46 species=Methylobacterium extorquens genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
cytochrome C biogenesis protein, transmembrane region
rifoxya2_full_scaffold_1140_12
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(7736..8206)
DNA (471bp) protein (157aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family id=3176295 bin=GWA2_Elusimicrobia_56_46 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
rifoxya2_full_scaffold_1140_13
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(8230..8835)
DNA (606bp) protein (202aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; K03270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family id=3176295 bin=GWA2_Elusimicrobia_56_46 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
rifoxya2_full_scaffold_1140_14
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(8892..9917)
DNA (1026bp) protein (342aa)
NAD-dependent epimerase/dehydratase Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Hypothetical conserved protein id=3176293 bin=GWA2_Elusimicrobia_56_46 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
NAD-dependent epimerase/dehydratase
rifoxya2_full_scaffold_1140_15
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(10225..10449)
DNA (225bp) protein (75aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
rifoxya2_full_scaffold_1140_16
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(11654..12709)
DNA (1056bp) protein (352aa)
aspartate semialdehyde dehydrogenase (EC:1.2.1.11); K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
aspartate semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase id=3176021 bin=GWA2_Elusimicrobia_56_46 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
rifoxya2_full_scaffold_1140_17
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(12971..14014)
DNA (1044bp) protein (348aa)
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
hypothetical protein id=3176023 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
rifoxya2_full_scaffold_1140_18
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(14016..14879)
DNA (864bp) protein (288aa)
putative transcriptional regulator; K03497 chromosome partitioning protein, ParB family Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Putative transcriptional regulator id=3176025 bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
putative transcriptional regulator
rifoxya2_full_scaffold_1140_19
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(15015..15854)
DNA (840bp) protein (280aa)
chromosome partitioning ATPase; K03496 chromosome partitioning protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
ATPases involved in chromosome partitioning id=3176276 bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
chromosome partitioning ATPase
rifoxya2_full_scaffold_1140_20
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(16142..16447)
DNA (306bp) protein (102aa)
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
hypothetical protein id=3176280 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
rifoxya2_full_scaffold_1140_21
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(16469..16843)
DNA (375bp) protein (125aa)
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Putative uncharacterized protein id=3176284 bin=GWA2_Elusimicrobia_56_46 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
rifoxya2_full_scaffold_1140_22
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(16849..17217)
DNA (369bp) protein (123aa)
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Putative uncharacterized protein id=3176286 bin=GWA2_Elusimicrobia_56_46 species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
rifoxya2_full_scaffold_1140_23
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(17791..18390)
DNA (600bp) protein (200aa)
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
hypothetical protein id=2138648 bin=GWB2_Elusimicrobium_63_22 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
rifoxya2_full_scaffold_1140_24
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(18412..19008)
DNA (597bp) protein (199aa)
FecI-like sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
RNA polymerase sigma factor id=2138650 bin=GWB2_Elusimicrobium_63_22 species=Ectothiorhodospira sp. PHS-1 genus=Ectothiorhodospira taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
FecI-like sigma-24 factor
rifoxya2_full_scaffold_1140_25
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(19991..21016)
DNA (1026bp) protein (342aa)
radical SAM enzyme, Cfr family; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Radical SAM enzyme, Cfr family id=3176017 bin=GWA2_Elusimicrobia_56_46 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
radical SAM enzyme, Cfr family
rifoxya2_full_scaffold_1140_26
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

21108..22943
DNA (1836bp) protein (612aa)
putative sulfatase (transmembrane protein); K07014 Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Putative sulfatase (Transmembrane protein) id=3176016 bin=GWA2_Elusimicrobia_56_46 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
putative sulfatase (transmembrane protein)
rifoxya2_full_scaffold_1140_27
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

22976..24022
DNA (1047bp) protein (349aa)
Putative uncharacterized protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Putative uncharacterized protein id=4722676 bin=GWA2_Elusi_like_61_42 species=Methanospirillum hungatei genus=Methanospirillum taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi rbh
Displaying 27 items

View Taxonomy