ggKbase home page

RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034

Search features with annotation key words

Displaying items 1-30 of 41 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_1
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(1..84)
DNA (84bp) protein (28aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_2
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(392..4045)
DNA (3654bp) protein (1218aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_3
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(4057..8844)
DNA (4788bp) protein (1596aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_4
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(8857..10431)
DNA (1575bp) protein (525aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_5
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

11052..11192
DNA (141bp) protein (47aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_6
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

11155..12114
DNA (960bp) protein (320aa)
Protein kinase family protein with PASTA domain n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KHZ4_9FIRM
protein kinase family protein with PASTA domain Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
protein kinase family protein with PASTA domain
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_7
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

12168..12596
DNA (429bp) protein (143aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_8
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

12663..13385
DNA (723bp) protein (241aa)
ribulose-phosphate 3-epimerase; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
rpe; ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=2 Tax=Bacillus cereus RepID=J8SF25_BACCE
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_9
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

13450..14556
DNA (1107bp) protein (369aa)
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26); K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] T
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26); K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] id=24608949 bin=RAAC11 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26)
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_10
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

14806..15075
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDL4_9FIRM
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_11
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

15087..15332
DNA (246bp) protein (82aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_12
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

15348..15590
DNA (243bp) protein (81aa)
Glutaredoxin-like protein n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VRX3_CLOSH
glutaredoxin-like protein, YruB-family Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
glutaredoxin-like protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_13
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

15610..15792
DNA (183bp) protein (61aa)
ferredoxin; K05337 ferredoxin Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Ferredoxin id=2032609 bin=GWD2_CPR2_39_7 species=Thermococcus barophilus genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
ferredoxin
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_14
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

15817..15996
DNA (180bp) protein (60aa)
UPI0003D1C13A related cluster n=1 Tax=unknown RepID=UPI0003D1C13A
4Fe-4S ferredoxin Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
4Fe-4S ferredoxin
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_15
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

16046..16717
DNA (672bp) protein (224aa)
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
endonuclease III (EC:4.2.99.18)
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] id=5240571 bin=GW2011_AR10_complete species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_16
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

16737..17999
DNA (1263bp) protein (421aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_17
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(18058..18816)
DNA (759bp) protein (253aa)
7-carboxy-7-deazaguanine synthase n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IZM0_DESMD
organic radical activating enzyme Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
organic radical activating enzyme
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_18
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(18820..19137)
DNA (318bp) protein (106aa)
plasmid stabilization system Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Plasmid stabilization system family protein id=4534108 bin=GWC2_Nitrospirae_57_13 species=unknown genus=unknown taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
plasmid stabilization system
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_19
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(19110..19310)
DNA (201bp) protein (67aa)
Putative uncharacterized protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Putative uncharacterized protein id=4534109 bin=GWC2_Nitrospirae_57_13 species=uncultured archaeon GZfos33H6 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_20
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

19394..20848
DNA (1455bp) protein (485aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_21
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

20897..22057
DNA (1161bp) protein (387aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_22
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(22115..22492)
DNA (378bp) protein (126aa)
PilT protein domain-containing protein; K07062 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
PilT protein domain-containing protein; K07062 id=14426034 bin=bin1_lowGC species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin1_lowGC organism_group=Unknown_CP
PilT protein domain-containing protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_23
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(22489..22722)
DNA (234bp) protein (78aa)
id=3589631 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
id=3589631 bin=GWF2_Lentisphaerae_38_69 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_24
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(22783..23334)
DNA (552bp) protein (184aa)
Segregation and condensation protein B n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=SCPB_DESRM
putative transcriptional regulator; K06024 segregation and condensation protein B Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
putative transcriptional regulator
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_25
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(23309..24037)
DNA (729bp) protein (243aa)
scpA; segregation and condensation protein A Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein; K05896 segregation and condensation protein A id=7202099 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
scpA; segregation and condensation protein A
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_26
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(24034..25020)
DNA (987bp) protein (329aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=4 Tax=Clostridium thermocellum RepID=A3DD92_CLOTH
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_27
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(25077..26765)
DNA (1689bp) protein (563aa)
stage V sporulation protein D (EC:2.4.1.129); K08384 stage V sporulation protein D (sporulation-specific penicillin-binding protein) Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
stage V sporulation protein D (EC:2.4.1.129)
Stage V sporulation protein D n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R8N6_AMMDK
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_28
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(26796..27716)
DNA (921bp) protein (307aa)
holA; DNA polymerase III subunit delta (EC:2.7.7.7); K02340 DNA polymerase III subunit delta [EC:2.7.7.7] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
holA; DNA polymerase III subunit delta (EC:2.7.7.7)
DNA polymerase III, delta subunit n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NY28_9BACL
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_29
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

27818..28186
DNA (369bp) protein (123aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_1034_30
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(28489..29970)
DNA (1482bp) protein (494aa)
hypothetical protein n=1 Tax=Geminocystis herdmanii RepID=UPI000348CB08
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
Displaying items 1-30 of 41 in total

View Taxonomy