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RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_652

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_652_1
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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comp(2..952)
DNA (951bp) protein (317aa)
ABC transporter-like protein; K05685 macrolide transport system ATP-binding/permease protein [EC:3.6.3.-] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
ABC transporter related n=1 Tax=Prosthecochloris aestuarii (strain DSM 271 / SK 413) RepID=B4S7Y5_PROA2
ABC transporter-like protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_652_2
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(939..1043)
DNA (105bp) protein (35aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_652_3
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(1118..2059)
DNA (942bp) protein (314aa)
hypothetical protein; K13888 macrolide-specific efflux protein MacA Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Efflux transporter, RND family, MFP subunit id=4523384 bin=GWC2_Nitrospirae_57_13 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_652_4
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(2056..3282)
DNA (1227bp) protein (409aa)
outer membrane efflux protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
FusA/NodT family protein id=5008707 bin=GWA2__Bacteriovorax-rel_49_15 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
outer membrane efflux protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_652_5
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(3499..4647)
DNA (1149bp) protein (383aa)
hypothetical protein; K01992 ABC-2 type transport system permease protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
ABC transporter; K09686 antibiotic transport system permease protein id=24392648 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
ybhR-2; ABC transporter membrane protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_652_6
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(4647..5825)
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B4CBCB
ABC transporter; K01992 ABC-2 type transport system permease protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
ABC transporter
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_652_7
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(5773..6714)
DNA (942bp) protein (314aa)
ABC transporter, ATP-binding protein n=2 Tax=Geobacter metallireducens RepID=Q39Q03_GEOMG
ABC transporter-like protein; K09687 antibiotic transport system ATP-binding protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
ybhF2; ABC-type multidrug transport system, ATPase c omponent
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_652_8
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(6711..7448)
DNA (738bp) protein (246aa)
ABC transporter ATP-binding component n=1 Tax=planctomycete KSU-1 RepID=I3IR08_9PLAN
ABC transporter-like protein; K01990 ABC-2 type transport system ATP-binding protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
ABC transporter-like protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_652_9
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(7494..8282)
DNA (789bp) protein (263aa)
HlyD family secretion protein; K01993 HlyD family secretion protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Secretion protein HlyD family protein id=2726597 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
HlyD family secretion protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_652_10
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(8439..8744)
DNA (306bp) protein (102aa)
RNP-1 like RNA-binding protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RNA recognition motif-containing protein id=2978179 bin=GWF2_Lentisphaerae_38_69 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
RNP-1 like RNA-binding protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_652_11
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(9074..10117)
DNA (1044bp) protein (348aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_652_12
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(10218..12434)
DNA (2217bp) protein (739aa)
Two-component sensor kinase n=1 Tax=planctomycete KSU-1 RepID=I3IIJ8_9PLAN
hypothetical protein
Two-component sensor kinase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_652_13
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(12628..14151)
DNA (1524bp) protein (508aa)
Insulinase-like:Peptidase M16 n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JQ96_9BACT
processing peptidase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
processing peptidase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_652_14
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(14225..15541)
DNA (1317bp) protein (439aa)
processing peptidase (EC:3.4.24.64) Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
processing peptidase (EC:3.4.24.64)
Processing peptidase n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TW36_MARTH
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_652_15
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(15700..17754)
DNA (2055bp) protein (685aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI0003827BB9
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_652_16
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(17853..20777)
DNA (2925bp) protein (975aa)
id=2121645 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
id=2121645 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_652_17
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

20992..21723
DNA (732bp) protein (244aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_652_18
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(21966..22622)
DNA (657bp) protein (219aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_652_19
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(22694..25921)
DNA (3228bp) protein (1076aa)
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
id=2090441 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_652_20
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(25952..26905)
DNA (954bp) protein (318aa)
PKD domain-containing protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
putative NHL repeat containing protein id=14425775 bin=bin1_lowGC species=Methanosphaerula palustris genus=Methanosphaerula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP
PKD domain-containing protein
Displaying 20 items

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