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RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_1
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

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79..420
DNA (342bp) protein (114aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_2
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

420..650
DNA (231bp) protein (77aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_3
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

640..2292
DNA (1653bp) protein (551aa)
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase id=4952316 bin=GWC2_Deltaproteobacteria_42_51 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_4
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(2279..2617)
DNA (339bp) protein (113aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_5
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(2926..3138)
DNA (213bp) protein (71aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_6
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

3263..4939
DNA (1677bp) protein (559aa)
acetolactate synthase large subunit; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Acetolactate synthase n=1 Tax=Thermincola potens (strain JR) RepID=D5XAE7_THEPJ
acetolactate synthase large subunit
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_7
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

4949..5437
DNA (489bp) protein (163aa)
acetolactate synthase, small subunit (EC:2.2.1.6); K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
acetolactate synthase, small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EB09_METMS
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_8
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

5430..6422
DNA (993bp) protein (331aa)
ilvC; ketol-acid reductoisomerase (EC:1.1.1.86); K00053 ketol-acid reductoisomerase [EC:1.1.1.86] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
ilvC; ketol-acid reductoisomerase (EC:1.1.1.86)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI0003661908
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_9
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(6427..8877)
DNA (2451bp) protein (817aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_10
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

8973..9452
DNA (480bp) protein (160aa)
Small multidrug export protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
small multidrug export protein id=7200808 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
Small multidrug export protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_11
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

9456..10724
DNA (1269bp) protein (423aa)
Uncharacterized RNA methyltransferase NEQ053 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Y053_NANEQ
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_12
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(10705..11088)
DNA (384bp) protein (128aa)
hypothetical protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
4-hydroxybenzoyl-CoA thioesterase id=2542057 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_13
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(11078..12418)
DNA (1341bp) protein (447aa)
3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8DJ30_9BACL
3-phosphoshikimate 1-carboxyvinyltransferase
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_14
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(12411..13271)
DNA (861bp) protein (287aa)
prephenate dehydrogenase (EC:1.3.1.12); K04517 prephenate dehydrogenase [EC:1.3.1.12] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I3Z1_DESAP
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_15
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

13343..14074
DNA (732bp) protein (244aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_16
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(14060..15232)
DNA (1173bp) protein (391aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXR1_METHD
putative homoserine kinase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
putative homoserine kinase
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_17
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(15229..15651)
DNA (423bp) protein (141aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_18
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(15654..16103)
DNA (450bp) protein (150aa)
PurE; phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Thermodesulfobacterium thermophilum RepID=UPI0003B52DDA
N5-carboxyaminoimidazole ribonucleotide mutase
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_19
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(16119..17369)
DNA (1251bp) protein (417aa)
2-isopropylmalate synthase 2 (EC:2.3.3.13); K02594 homocitrate synthase NifV [EC:2.3.3.14] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
2-isopropylmalate synthase 2 (EC:2.3.3.13)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI00035CCCE7
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_20
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

17572..18414
DNA (843bp) protein (281aa)
shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI000364D1E6
shikimate 5-dehydrogenase
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_21
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

18452..19432
DNA (981bp) protein (327aa)
General secretory pathway protein E n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BXQ0_DELAS
general secretory pathway protein E; K02454 general secretion pathway protein E Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
general secretory pathway protein E
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_22
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(19434..19754)
DNA (321bp) protein (107aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_23
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

19864..20568
DNA (705bp) protein (235aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51); K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferase id=4201600 bin=GWC2_Deltaproteobacteria_55_46 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_24
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

20589..21086
DNA (498bp) protein (166aa)
3-isopropylmalate dehydratase, small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
3-isopropylmalate dehydratase small subunit n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CKQ9_SYNLT
3-isopropylmalate dehydratase, small subunit
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_25
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

21086..21517
DNA (432bp) protein (144aa)
MgtC family protein n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AB91_CARHZ
mgtC family protein; K07507 putative Mg2+ transporter-C (MgtC) family protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
mgtC family protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_26
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

21520..22272
DNA (753bp) protein (251aa)
yugP; putative membrane protease YugP (EC:3.4.24.-) Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
yugP; putative membrane protease YugP (EC:3.4.24.-)
peptidase membrane zinc metallopeptidase; K06973 id=17272355 bin=RBG_16_Aminicenantes_66_30 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_27
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

22347..23027
DNA (681bp) protein (227aa)
Peptidase membrane zinc metallopeptidase n=1 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V9M6_THELD
peptidase membrane zinc metallopeptidase; K06973 Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
peptidase membrane zinc metallopeptidase
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_28
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

23011..23919
DNA (909bp) protein (303aa)
tRNA isopentenyltransferase MiaA; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
tRNA dimethylallyltransferase (EC:2.5.1.75)
tRNA dimethylallyltransferase n=2 Tax=Brevibacillus laterosporus RepID=F7TYA4_BRELA
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_29
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(24029..25297)
DNA (1269bp) protein (423aa)
histidinol dehydrogenase (EC:1.1.1.23); K00013 histidinol dehydrogenase [EC:1.1.1.23] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BDW0_9FIRM
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_429_30
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(25294..26367)
DNA (1074bp) protein (358aa)
nucleotidyl transferase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Nucleotidyl transferase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NP37_ROSCS
nucleotidyl transferase
Displaying items 1-30 of 40 in total

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