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RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_1
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(185..1987)
DNA (1803bp) protein (601aa)
ABC transporter ATP-binding protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Putative uncharacterized protein id=2187789 bin=GWE2_RBX1_39_32 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ABC transporter ATP-binding protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_2
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(2028..3116)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CZ16_9BACT
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_3
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(3419..3613)
DNA (195bp) protein (65aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_4
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(3655..5181)
DNA (1527bp) protein (509aa)
PIF1 helicase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
PIF1 helicase id=2761201 bin=GWC1_CPR2_39_9 species=Anaerobaculum mobile genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
PIF1 helicase
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_5
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(5312..5428)
DNA (117bp) protein (39aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_6
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

5542..6885
DNA (1344bp) protein (448aa)
transporter n=1 Tax=Clostridium tunisiense RepID=UPI0002F550E9
amino acid carrier protein; K03310 alanine or glycine:cation symporter, AGCS family Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
amino acid carrier protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_7
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(7057..7383)
DNA (327bp) protein (109aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_8
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(7376..7903)
DNA (528bp) protein (176aa)
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Putative uncharacterized protein id=2260306 bin=GWB2_Elusimicrobia_63_16 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
hypothetical protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_9
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(8149..8307)
DNA (159bp) protein (53aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-604-O16 RepID=UPI0003645A01
S23 ribosomal protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
S23 ribosomal protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_10
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

8510..8689
DNA (180bp) protein (60aa)
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein id=5100121 bin=WS6_GWC1_33_20 species=WS6_GWF1_33_233 genus=WS6_GWF1_33_233 taxon_order=WS6_GWF1_33_233 taxon_class=WS6_GWF1_33_233 phylum=WS6 tax=WS6_GWC1_33_20 organism_group=WS6 (Doikabacteria)
putative membrane protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_11
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

8782..9006
DNA (225bp) protein (75aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_12
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(8969..10450)
DNA (1482bp) protein (494aa)
decarboxylase n=1 Tax=Mycobacterium abscessus RepID=UPI00037E65BE
Orn/DAP/Arg decarboxylase 2 Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
diaminopimelate decarboxylase
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_13
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(10512..10928)
DNA (417bp) protein (139aa)
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Putative uncharacterized protein id=4553065 bin=GWF2_OP3_38_59 species=Methanosarcina barkeri genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
hypothetical protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_14
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(10994..11269)
DNA (276bp) protein (92aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_15
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(11285..11560)
DNA (276bp) protein (92aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_16
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(11715..11999)
DNA (285bp) protein (95aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_17
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(12270..12737)
DNA (468bp) protein (156aa)
Transcription elongation factor GreA n=1 Tax=Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01) RepID=I0GKT6_CALEA
greA; transcription elongation factor GreA; K03624 transcription elongation factor GreA Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
greA; transcription elongation factor GreA
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_18
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(12819..13067)
DNA (249bp) protein (83aa)
MtN3 and saliva related transmembrane protein (modular protein) Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Uncharacterized protein id=2017815 bin=GWD2_RBX1-related_39_127 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
MtN3 and saliva related transmembrane protein (modular protein)
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_19
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(13108..13584)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BH93_9EURY
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_20
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(13622..14545)
DNA (924bp) protein (308aa)
permease; K07089 Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein; K07089 id=1242311 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
permease
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_21
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(14535..14951)
DNA (417bp) protein (139aa)
FeS cluster assembly scaffold protein NifU Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Iron-sulfur cofactor synthesis protein id=3376731 bin=GWF2_OP9_related_35_9 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
FeS cluster assembly scaffold protein NifU
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_22
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(14954..16123)
DNA (1170bp) protein (390aa)
cysteine desulfurase NifS; K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
cysteine desulfurase NifS (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S3B4_THEOJ
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_23
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(16120..16536)
DNA (417bp) protein (139aa)
Transcriptional regulator, BadM/Rrf2 family n=5 Tax=Pelosinus fermentans RepID=I8RYU0_9FIRM
Iron-sulfur cluster regulator IscR Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
transcriptional regulator, BadM/Rrf2 family
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_24
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(16591..17391)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VVF3_THESW
hypothetical protein; K06864 uncharacterized protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_25
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(17623..18033)
DNA (411bp) protein (137aa)
Iron-sulfur cluster-binding protein, ferredoxin-like protein n=2 Tax=Dehalococcoides mccartyi RepID=D2BHX1_DEHSV
iron-sulfur cluster-binding protein, ferredoxin-like protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
iron-sulfur cluster-binding protein, ferredoxin-like protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_26
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(18035..19249)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8DZT2_DICTD
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_27
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(19354..20280)
DNA (927bp) protein (309aa)
CysK; cysteine synthase; K01738 cysteine synthase A [EC:2.5.1.47] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Cysteine synthase n=1 Tax=planctomycete KSU-1 RepID=I3IK71_9PLAN
CysK; cysteine synthase
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_28
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(20342..20812)
DNA (471bp) protein (157aa)
Rrf2 family protein n=1 Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DLS1_9CHRO
BadM/Rrf2 family transcriptional regulator Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
putative transcriptional regulator of cysteine synthase, Rrf2 family
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_29
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(20867..23359)
DNA (2493bp) protein (831aa)
heavy-metal transporting P-type ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
heavy-metal transporting P-type ATPase (EC:3.6.3.4)
Heavy-metal transporting P-type ATPase id=5800398 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_362_30
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(23468..23788)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D4D7_9BACT
DsrE family protein; K06039 uncharacterized protein involved in oxidation of intracellular sulfur Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
Displaying items 1-30 of 49 in total

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