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RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_806

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_806_1
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

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137..1663
DNA (1527bp) protein (509aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, subunits gamma and tau n=1 Tax=Thermincola potens (strain JR) RepID=D5X8W4_THEPJ
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_806_2
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

1660..1971
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI0002F8DCF6
DNA-binding protein, YbaB/EbfC family Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_806_3
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

2128..2721
DNA (594bp) protein (198aa)
Recombination protein RecR n=1 Tax=uncultured bacterium RepID=K2DBU5_9BACT
recombination protein RecR Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
recombination protein RecR
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_806_4
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

2718..3410
DNA (693bp) protein (231aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_806_5
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

3424..4005
DNA (582bp) protein (194aa)
pyruvate ferredoxin oxidoreductase subunit gamma (EC:1.2.7.1); K00172 pyruvate ferredoxin oxidoreductase, gamma subunit [EC:1.2.7.1] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
pyruvate:ferredoxin oxidoreductase gamma subunit ; K00172 pyruvate ferredoxin oxidoreductase, gamma subunit [EC:1.2.7.1] id=7201017 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
pyruvate ferredoxin oxidoreductase subunit gamma (EC:1.2.7.1)
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_806_6
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

4008..4301
DNA (294bp) protein (98aa)
pyruvate:ferredoxin oxidoreductase delta subunit ; K00171 pyruvate ferredoxin oxidoreductase, delta subunit [EC:1.2.7.1] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
pyruvate synthase subunit PorD (EC:1.2.7.1); K00171 pyruvate ferredoxin oxidoreductase, delta subunit [EC:1.2.7.1] id=7201016 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
pyruvate:ferredoxin oxidoreductase delta subunit
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_806_7
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

4305..5483
DNA (1179bp) protein (393aa)
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K00169 pyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.1] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI00036073DB
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_806_8
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

5487..6410
DNA (924bp) protein (308aa)
pyruvate:ferredoxin oxidoreductase beta subunit ; K00170 pyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.1] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
pyruvate:ferredoxin oxidoreductase beta subunit ; K00170 pyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.1] id=7201012 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
pyruvate:ferredoxin oxidoreductase beta subunit
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_806_9
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

6591..6875
DNA (285bp) protein (95aa)
transcriptional regulator n=1 Tax=Laceyella sacchari RepID=UPI0003B30BAD
HlbB protein; K03530 DNA-binding protein HU-beta Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
HlbB protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_806_10
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

6900..8411
DNA (1512bp) protein (504aa)
single-stranded nucleic acid binding R3H domain-containing protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
single-stranded nucleic acid binding R3H domain-containing protein id=14633013 bin=bin9_gal15 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
single-stranded nucleic acid binding R3H domain-containing protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_806_11
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(8445..10721)
DNA (2277bp) protein (759aa)
rnr; exoribonuclease R; K12573 ribonuclease R [EC:3.1.-.-] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Ribonuclease R n=1 Tax=Halorhodospira halophila (strain DSM 244 / SL1) RepID=A1WUS9_HALHL
rnr; exoribonuclease R
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_806_12
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

10777..10944
DNA (168bp) protein (56aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_806_13
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(10931..12733)
DNA (1803bp) protein (601aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_806_14
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(12789..14396)
DNA (1608bp) protein (536aa)
L-aspartate oxidase (EC:1.4.3.16); K00278 L-aspartate oxidase [EC:1.4.3.16] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase n=2 Tax=Desulfotomaculum RepID=F6B542_DESCC
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_806_15
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

14414..14650
DNA (237bp) protein (79aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_806_16
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

14737..15300
DNA (564bp) protein (188aa)
hypothetical protein
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein id=1730740 bin=GWA2_CPR4_42_17 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_806_17
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

16041..17000
DNA (960bp) protein (320aa)
glycoside hydrolase family protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Glycoside hydrolase family 26 id=4952476 bin=GWA2_Ignavibacteriae_54_16_partial species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
glycoside hydrolase family protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_806_18
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

17006..17251
DNA (246bp) protein (82aa)
Putative endonuclease containing a URI domain n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K4Y7_HALHC
putative endonuclease containing a URI domain Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
putative endonuclease containing a URI domain
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_806_19
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

17315..17743
DNA (429bp) protein (143aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M3B2_GEODF
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_806_20
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(17759..18517)
DNA (759bp) protein (253aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_806_21
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(18624..19511)
DNA (888bp) protein (296aa)
hypothetical protein; K01163 hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein; K01163 hypothetical protein id=24398172 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_806_22
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(19508..19915)
DNA (408bp) protein (136aa)
id=24423512 Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
id=24423512 bin=RBG_19FT_COMBO_Aminicenantes_65_30 tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_806_23
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

19978..20592
DNA (615bp) protein (205aa)
lytic transglycosylase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
lytic murein transglycosylase id=24608131 bin=RAAC11 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
lytic transglycosylase
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_806_24
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

20648..21307
DNA (660bp) protein (220aa)
ComEA protein n=1 Tax=Mitsuokella sp. oral taxon 131 str. W9106 RepID=U2TDT8_9FIRM
competence protein ComEA; K02237 competence protein ComEA Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
comEA; putative competence protein ComEA
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_806_25
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

21304..21729
DNA (426bp) protein (142aa)
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein id=36306 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_806_26
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

21803..22705
DNA (903bp) protein (301aa)
ComEC/Rec2-related protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YB16_HALP7
ComEC/Rec2-like protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
ComEC/Rec2-like protein
Displaying 26 items

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