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RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_1384

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_1384_1
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

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127..924
DNA (798bp) protein (266aa)
id=2076481 Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
id=2076481 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_1384_2
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

990..1883
DNA (894bp) protein (298aa)
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Putative uncharacterized protein id=4815946 bin=GWA2_Elusi_like_61_42 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
hypothetical protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_1384_3
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

1883..2008
DNA (126bp) protein (42aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_1384_4
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

2130..2225
DNA (96bp) protein (32aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_1384_5
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

2608..5700
DNA (3093bp) protein (1031aa)
type I site-specific deoxyribonuclease, HsdR family Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Type I site-specific deoxyribonuclease, HsdR family id=1899229 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
type I site-specific deoxyribonuclease, HsdR family
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_1384_6
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

5745..6977
DNA (1233bp) protein (411aa)
Slp3 (Fragment) n=1 Tax=Lysinibacillus sphaericus RepID=M4N7T2_LYSSH
s-layer domain-containing protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
s-layer domain-containing protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_1384_7
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

6979..8712
DNA (1734bp) protein (578aa)
Putative uncharacterized protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5S936_9BACT
squalene cyclase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
squalene cyclase
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_1384_8
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

8709..9611
DNA (903bp) protein (301aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_1384_9
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

9612..11822
DNA (2211bp) protein (737aa)
histidine kinase (EC:2.7.3.-); K00936 [EC:2.7.3.-] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Putative Histidine kinase, contains GAF domain id=2078320 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
histidine kinase
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_1384_10
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(11829..12026)
DNA (198bp) protein (66aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_1384_11
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

12212..13045
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YKM4_9BACT
KilA/APSES-type HTH DNA-binding domain-containing protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
KilA/APSES-type HTH DNA-binding domain-containing protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_1384_12
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

13177..13626
DNA (450bp) protein (150aa)
helix-turn-helix domain containing protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Mobile mystery protein A id=3998729 bin=GWF2_OP9-related_38_17 species=Treponema succinifaciens genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
helix-turn-helix domain containing protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_1384_13
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

13626..14219
DNA (594bp) protein (198aa)
cell division protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Uncharacterized protein id=4932766 bin=GWA2_Elusimicrobia_69_24 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
cell division protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_1384_14
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

14325..16889
DNA (2565bp) protein (855aa)
phosphoenolpyruvate synthase (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase/pyruvate phosphate dikinase-like id=4943368 bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_1384_15
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

17117..18643
DNA (1527bp) protein (509aa)
Fis family transcriptional regulator n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B634C8
Fis Family NifA subfamily transcriptional regulator; K02584 Nif-specific regulatory protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Fis Family NifA subfamily transcriptional regulator
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_1384_16
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

18928..19359
DNA (432bp) protein (144aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_1384_17
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

19372..20619
DNA (1248bp) protein (416aa)
ammonium transporter; K03320 ammonium transporter, Amt family Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Ammonium transporter id=4082423 bin=GWF2_OP9_related_35_9 species=unknown genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
ammonium transporter
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_1384_18
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

20632..20973
DNA (342bp) protein (114aa)
nitrogen regulatory protein P-II; K04751 nitrogen regulatory protein P-II 1 Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Nitrogen regulatory protein P-II id=4619877 bin=GWF2_OP3_38_59 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
nitrogen regulatory protein P-II
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_1384_19
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(21073..21600)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Geobacter sp. (strain M21) RepID=C6E5W4_GEOSM
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_1384_20
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

21638..22051
DNA (414bp) protein (138aa)
Hypothetical conserved protein n=1 Tax=uncultured planctomycete RepID=H5SCD7_9BACT
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
secondary thiamine-phosphate synthase enzyme
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_1384_21
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

22175..23392
DNA (1218bp) protein (406aa)
Ammonium transporter n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QFA8_DESB2
ammonium transporter; K03320 ammonium transporter, Amt family Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
ammonium transporter
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_1384_22
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

23408..23746
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WR02_METH6
Nitrogen regulatory protein P-II; K04751 nitrogen regulatory protein P-II 1 Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Nitrogen regulatory protein P-II
Displaying 22 items

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