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RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_1
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

115..1158
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FHB0_9BACT
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_2
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(1155..1334)
DNA (180bp) protein (60aa)
putative enzyme (EC:5.3.2.-) Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
putative enzyme (EC:5.3.2.-)
4-oxalocrotonate tautomerase id=5800461 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_3
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

1446..2315
DNA (870bp) protein (290aa)
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A182_9BACT
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_4
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

2312..2932
DNA (621bp) protein (207aa)
Ureidoglycolate lyase (EC:4.3.2.3) Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Ureidoglycolate lyase (EC:4.3.2.3)
hypothetical protein n=1 Tax=Methanothermococcus thermolithotrophicus RepID=UPI00037163A4
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_5
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(3023..3202)
DNA (180bp) protein (60aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_6
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

3439..4077
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2GFV9_9BACT
Uncharacterized protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_7
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

4310..5167
DNA (858bp) protein (286aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_8
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(5169..5900)
DNA (732bp) protein (244aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_9
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

5997..6755
DNA (759bp) protein (253aa)
metallo-beta-lactamase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Uncharacterized protein id=4748255 bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
metallo-beta-lactamase family protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_10
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

6806..8140
DNA (1335bp) protein (445aa)
protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Protein translocase subunit SecD id=2149058 bin=GWD2_RBX1-related_39_127 species=Dethiosulfovibrio peptidovorans genus=Dethiosulfovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
protein-export membrane protein SecD
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_11
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

8137..9009
DNA (873bp) protein (291aa)
Protein-export membrane protein SecF n=1 Tax=Thermincola potens (strain JR) RepID=D5XEJ7_THEPJ
protein-export membrane protein SecF; K03074 preprotein translocase subunit SecF Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
protein-export membrane protein SecF
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_12
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

9145..9924
DNA (780bp) protein (260aa)
UDP-diphosphatase; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Undecaprenyl-diphosphatase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D6W8_METSW
UDP-diphosphatase
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_13
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

10167..10964
DNA (798bp) protein (266aa)
indole-3-glycerol-phosphate synthase (EC:4.1.1.48); K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
indole-3-glycerol-phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase n=1 Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B7I2_DESCC
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_14
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

10961..11938
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Microcystis aeruginosa PCC 9717 RepID=I4FPP6_MICAE
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_15
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

11963..12445
DNA (483bp) protein (161aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Holliday junction resolvase n=1 Tax=Paenibacillus sp. JC66 RepID=UPI000289415C
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_16
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

12442..13041
DNA (600bp) protein (200aa)
hypothetical protein; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Clostridium sp. (strain SY8519) RepID=F7V697_CLOSS
hypothetical protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_17
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(13038..13559)
DNA (522bp) protein (174aa)
HAD superfamily (Subfamily IIIA) phosphatase, TIGR01668 n=1 Tax=Thermoanaerobacter thermohydrosulfuricus WC1 RepID=M8CT09_THETY
HAD superfamily phosphatase; K07015 Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
HAD superfamily hydrolase
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_18
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(13561..13791)
DNA (231bp) protein (77aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_19
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(13788..14669)
DNA (882bp) protein (294aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WCL2_FUSMR
glutathione-binding protein GsiB; K13889 glutathione transport system substrate-binding protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
glutathione-binding protein GsiB
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_20
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(14666..15223)
DNA (558bp) protein (186aa)
hydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit beta; K01678 fumarate hydratase subunit beta [EC:4.2.1.2] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit beta
Fumarate hydratase beta subunit id=2235423 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_21
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(15223..16065)
DNA (843bp) protein (281aa)
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha (EC:4.2.1.2); K01677 fumarate hydratase subunit alpha [EC:4.2.1.2] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha (EC:4.2.1.2)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CPT2_DESK7
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_22
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(16187..17110)
DNA (924bp) protein (308aa)
malate dehydrogenase; K00024 malate dehydrogenase [EC:1.1.1.37] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Malate dehydrogenase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E951_METEZ
malate dehydrogenase
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_23
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

17230..17400
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Acidaminococcus sp. CAG:917 RepID=R7KBJ3_9FIRM
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_24
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

17474..17710
DNA (237bp) protein (79aa)
Glutaredoxin-like protein n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VRX3_CLOSH
glutaredoxin-like protein, YruB-family Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
glutaredoxin-like protein, YruB-family
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_25
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

17723..17899
DNA (177bp) protein (59aa)
4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I3N2_DESAP
4Fe-4S ferredoxin; K05337 ferredoxin Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_26
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

17903..19234
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZFN7_9CLOT
major facilitator superfamily transporter; K03292 glycoside/pentoside/hexuronide:cation symporter, GPH family Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
major facilitator superfamily transporter
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_27
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

19235..19426
DNA (192bp) protein (64aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=1 Tax=Adlercreutzia equolifaciens DSM 19450 RepID=S6BXM5_9ACTN
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_28
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(19511..20452)
DNA (942bp) protein (314aa)
aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase id=2078533 bin=GWD2_RBX1-related_39_127 species=unknown genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_29
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

20497..21303
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00036E8A8B
ApbE family lipoprotein; K03734 thiamine biosynthesis lipoprotein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
thiamine biosynthesis protein
RIFOXYA2_FULL_CP_41_14_rifoxya2_full_scaffold_654_30
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

21300..22487
DNA (1188bp) protein (396aa)
ackA; acetate kinase; K00925 acetate kinase [EC:2.7.2.1] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Acetate kinase n=1 Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7ALM6_GEOSK
ackA; acetate kinase
Displaying items 1-30 of 50 in total

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