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RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3

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Displaying items 1-30 of 554 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_1
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(3..899)
DNA (897bp) protein (299aa)
arsenical-resistance protein; K03325 arsenite transporter, ACR3 family Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
arsenical-resistance protein id=3070278 bin=GWC1_Spirochaetes_27_15 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
arsenical-resistance protein
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_2
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(892..1194)
DNA (303bp) protein (101aa)
ferredoxin Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Dissimilatory sulfite reductase (Desulfoviridin), alpha/beta subunit id=2995534 bin=GWF2_Bacteroidetes_35_48 species=Desulfosporosinus youngiae genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
ferredoxin
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_3
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(1194..2192)
DNA (999bp) protein (333aa)
Putative corrinoidprotein n=1 Tax=Dehalococcoides mccartyi DCMB5 RepID=M1QUH5_9CHLR
putative corrinoidprotein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
putative corrinoidprotein
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_4
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(2189..2503)
DNA (315bp) protein (105aa)
heavy metal resistance transcription regulator; K03892 ArsR family transcriptional regulator Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Transcriptional regulator, ArsR family id=3843489 bin=GWC2_Pelobacter_58_13 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
heavy metal resistance transcription regulator
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_5
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

2610..3332
DNA (723bp) protein (241aa)
hypothetical protein; K07090 Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
hypothetical protein id=5801392 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hypothetical protein
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_6
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(3519..3953)
DNA (435bp) protein (145aa)
putative permease Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
putative permease id=7202004 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
putative permease
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_7
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(3953..4423)
DNA (471bp) protein (157aa)
putative permease Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
putative permease id=7202005 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
putative permease
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_8
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(4476..5417)
DNA (942bp) protein (314aa)
permease; K07089 Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
permease; K07089 id=5094984 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
hypothetical protein
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_9
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

5494..6387
DNA (894bp) protein (298aa)
ROK family protein; K00845 glucokinase [EC:2.7.1.2] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
ROK family protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDD5_THET1
ROK family protein
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_10
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

6384..6989
DNA (606bp) protein (202aa)
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-); K02501 glutamine amidotransferase [EC:2.4.2.-] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T0T8_CLOSG
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_11
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

6982..7686
DNA (705bp) protein (235aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16); K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M2J4_CLOCD
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_12
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(7689..9443)
DNA (1755bp) protein (585aa)
phosphoenolpyruvate carboxykinase (GTP) (EC:4.1.1.32); K01596 phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
phosphoenolpyruvate carboxykinase (GTP) (EC:4.1.1.32)
Phosphoenolpyruvate carboxykinase [GTP] id=4513883 bin=GWC2_OP3_44_8 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_13
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

9473..10117
DNA (645bp) protein (215aa)
alpha-ribazole phosphatase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Phosphoglycerate mutase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HUC2_9FIRM
alpha-ribazole phosphatase
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_14
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(10114..10569)
DNA (456bp) protein (152aa)
flagellar export protein FliJ; K02413 flagellar FliJ protein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Flagellar export protein FliJ id=1959956 bin=GWE2_RBX1_39_32 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
flagellar export protein FliJ
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_15
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(10569..11888)
DNA (1320bp) protein (440aa)
fliI; flagellar protein export ATPase flii; K02412 flagellum-specific ATP synthase [EC:3.6.3.14] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
ATPase, FliI/YscN family id=1959952 bin=GWE2_RBX1_39_32 species=unknown genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
fliI; flagellar protein export ATPase flii
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_16
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(11885..12562)
DNA (678bp) protein (226aa)
flagellar assembly protein FliH/type III secretion system HrpE; K02411 flagellar assembly protein FliH Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
flagellar biosynthesis/type III secretory pathway protein-like protein id=1959950 bin=GWE2_RBX1_39_32 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
flagellar assembly protein FliH/type III secretion system HrpE
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_17
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(12565..13062)
DNA (498bp) protein (166aa)
id=1959948 Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
id=1959948 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_18
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(13062..14510)
DNA (1449bp) protein (483aa)
Flagellar M-ring protein n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CLZ7_SYNLT
fliF; flagellar M-ring protein FliF; K02409 flagellar M-ring protein FliF Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
flagellar M-ring protein FliF
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_19
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(14523..14861)
DNA (339bp) protein (113aa)
Flagellar hook-basal body complex protein FliE Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Flagellar hook-basal body complex protein FliE id=4210419 bin=GWF2_OP9_related_35_9 species=Exiguobacterium sp. genus=Exiguobacterium taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_20
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(14878..15309)
DNA (432bp) protein (144aa)
Flagellar basal-body rod protein FlgC n=10 Tax=Thermoanaerobacter RepID=B0K1T3_THEPX
flagellar basal-body rod protein FlgC; K02388 flagellar basal-body rod protein FlgC Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
flagellar basal-body rod protein FlgC
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_21
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(15315..15617)
DNA (303bp) protein (101aa)
id=4210415 Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
id=4210415 bin=GWF2_OP9_related_35_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_22
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(15619..16287)
DNA (669bp) protein (223aa)
fliA; RNA polymerase sigma factor for flagellar operon fliA; K02405 RNA polymerase sigma factor for flagellar operon FliA Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RNA polymerase sigma factor id=1959940 bin=GWE2_RBX1_39_32 species=Caldicellulosiruptor saccharolyticus genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
fliA; RNA polymerase sigma factor for flagellar operonfliA
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_23
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(16316..16615)
DNA (300bp) protein (100aa)
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_24
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(16616..17698)
DNA (1083bp) protein (361aa)
flgI; flagellar basal body P-ring protein; K02394 flagellar P-ring protein precursor FlgI Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Flagellar P-ring protein id=1817828 bin=GWD2_RBX1-related_39_127 species=Acetonema longum genus=Acetonema taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
flgI; flagellar basal body P-ring protein
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_25
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(17700..18359)
DNA (660bp) protein (220aa)
flgH; flagellar L-ring protein FlgH; K02393 flagellar L-ring protein precursor FlgH Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Flagellar L-ring protein id=1817823 bin=GWD2_RBX1-related_39_127 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
flgH; flagellar L-ring protein FlgH
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_26
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(18356..19069)
DNA (714bp) protein (238aa)
flagellar basal body P-ring biosynthesis protein FlgA n=1 Tax=Pseudomonas caeni RepID=UPI0003B6D10D
SAF domain-containing protein; K02386 flagella basal body P-ring formation protein FlgA Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
flagellar basal body P-ring biosynthesis protein FlgA
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_27
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(19069..19863)
DNA (795bp) protein (265aa)
flagellar basal-body rod protein FlgG; K02392 flagellar basal-body rod protein FlgG Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Flagellar basal-body rod protein FlgG id=1959910 bin=GWE2_RBX1_39_32 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
flagellar basal-body rod protein FlgG
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_28
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(19879..20622)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000302DB08
flagellar basal-body rod protein; K02392 flagellar basal-body rod protein FlgG Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
flagellar basal-body rod protein FlgF
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_29
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(20657..20968)
DNA (312bp) protein (104aa)
type III secretion exporter; K04061 flagellar biosynthesis protein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
hypothetical protein; K04061 flagellar biosynthesis protein id=24609086 bin=RAAC11 species=Paenibacillus fonticola genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
type III secretion exporter
RIFOXYA2_FULL_CP_46_56_rifoxya2_full_scaffold_3_30
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(20971..22278)
DNA (1308bp) protein (436aa)
id=1959899 Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
id=1959899 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Displaying items 1-30 of 554 in total

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