ggKbase home page

RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2067

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2067_1
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(90..455)
DNA (366bp) protein (122aa)
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Transcriptional regulatory protein pilR id=4139373 bin=GWC2_Nitrospirae_57_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2067_2
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

542..925
DNA (384bp) protein (128aa)
putative nucleotide pyrophosphohydrolase MazG ; K02499 tetrapyrrole methylase family protein / MazG family protein Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
MazG family protein id=4349185 bin=GWA2_Elusimicrobia_56_46 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
putative nucleotide pyrophosphohydrolase MazG
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2067_3
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(941..1846)
DNA (906bp) protein (302aa)
hypothetical protein Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
hypothetical protein id=2209189 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2067_4
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(1851..2762)
DNA (912bp) protein (304aa)
Tyrosine recombinase XerC n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GYR5_UNCTG
tyrosine recombinase XerC ; K03733 integrase/recombinase XerC Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
tyrosine recombinase XerC
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2067_5
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(2762..4786)
DNA (2025bp) protein (675aa)
DNA topoisomerase I ; K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
DNA topoisomerase 1 n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GYR4_UNCTG
DNA topoisomerase I
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2067_6
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(4967..6094)
DNA (1128bp) protein (376aa)
DNA processing protein DprA; K04096 DNA processing protein Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
DNA processing protein id=1251181 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
DNA processing protein DprA
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2067_7
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(6133..6912)
DNA (780bp) protein (260aa)
NLP/P60 protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEX2_GEOUR
NLP/P60 protein Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
NLP/P60 protein
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2067_8
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(6948..7334)
DNA (387bp) protein (129aa)
Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2067_9
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(7353..8270)
DNA (918bp) protein (306aa)
Stackhouse genomic scaffold, scaffold_62 n=1 Tax=Chondrus crispus RepID=R7QP88_CHOCR
fibrous sheath CABYR-binding protein-like Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
hypothetical protein
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2067_10
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(8439..9968)
DNA (1530bp) protein (510aa)
Putative enzyme (N-terminal) transcriptional regulator with P-loop containing NTP hydrolase domain (C-terminal)(YifB) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMN1_9BACT
transcriptional regulator Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
transcriptional regulator
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2067_11
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(10039..10971)
DNA (933bp) protein (311aa)
type II restriction endonuclease (EC:3.1.21.4) Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
type II restriction endonuclease (EC:3.1.21.4)
BsuBIPstI restriction endonuclease domain protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z2T1_9EURY
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2067_12
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(10964..12619)
DNA (1656bp) protein (552aa)
type II modification methyltransferase (EC:2.1.1.72) Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
type II modification methyltransferase (EC:2.1.1.72)
DNA modification methylase n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z2T2_9EURY
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2067_13
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(12912..14603)
DNA (1692bp) protein (564aa)
modification methylase; K07318 adenine-specific DNA-methyltransferase [EC:2.1.1.72] Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
bha:BH4004 modification methylase; K07318 adenine-specific DNA-methyltransferase [EC:2.1.1.72] id=725776 bin=RAAC2_WWE3 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=RAAC2_WWE3 organism_group=WWE3
hypothetical protein
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2067_14
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(14699..16708)
DNA (2010bp) protein (670aa)
primosomal protein N' ; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
Primosomal protein N n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1H0K0_UNCTG
primosomal protein N'
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2067_15
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(16985..17665)
DNA (681bp) protein (227aa)
uracil-DNA glycosylase ; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
Uracil-DNA glycosylase id=3589521 bin=GWA2_Elusimicrobia_51_34 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
uracil-DNA glycosylase
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2067_16
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(17619..18299)
DNA (681bp) protein (227aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (EC:6.3.2.5); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase id=3547923 bin=GWC2_Deltaproteobacteria_42_51 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2067_17
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(18324..18905)
DNA (582bp) protein (194aa)
phosphopantothenoylcysteine decarboxylase ; K01598 phosphopantothenoylcysteine decarboxylase [EC:4.1.1.36] Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
Phosphopantothenoylcysteine decarboxylase n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1H0K3_UNCTG
phosphopantothenoylcysteine decarboxylase
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2067_18
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(18886..19188)
DNA (303bp) protein (101aa)
Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2067_19
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(19242..19838)
DNA (597bp) protein (199aa)
guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8] Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S307_THEOJ
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2067_20
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(19896..20369)
DNA (474bp) protein (158aa)
Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2067_21
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(20369..21241)
DNA (873bp) protein (291aa)
pseudouridylate synthase ; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
Pseudouridine synthase n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1H0R5_UNCTG
pseudouridylate synthase
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2067_22
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(21234..21989)
DNA (756bp) protein (252aa)
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
Prolipoprotein diacylglyceryl transferase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FFR0_DESAA
prolipoprotein diacylglyceryl transferase
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2067_23
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(22158..23492)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RQ42_SPITD
hypothetical protein Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
hypothetical protein
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2067_24
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(23489..24661)
DNA (1173bp) protein (391aa)
Ceramide glucosyltransferase, putative n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6YTL3_MELRP
ceramide glucosyltransferase Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
ceramide glucosyltransferase
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2067_25
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(24681..25133)
DNA (453bp) protein (151aa)
CBS domain containing membrane protein Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
CBS domain containing membrane protein id=3687614 bin=GWF2_OP3_43_52 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
CBS domain containing membrane protein
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2067_26
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(25219..25365)
DNA (147bp) protein (49aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DG67_9EURY
hypothetical protein
Putative uncharacterized protein Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
RIFOXYA2_FULL_Elusimicrobia_related_50_26_rifoxya2_full_scaffold_2067_27
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(25386..25964)
DNA (579bp) protein (193aa)
cytoplasmic M42 family peptidase ; K01179 endoglucanase [EC:3.2.1.4] Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
Cytoplasmic M42 family peptidase id=1951440 bin=GWB2_CP_45_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
cytoplasmic M42 family peptidase
Displaying 27 items

View Taxonomy