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rifoxyb1_full_scaffold_1061

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyb1_full_scaffold_1061_1
unknown

Not on your lists

comp(3..95)
DNA (93bp) protein (31aa)

This feature has no annotations

rifoxyb1_full_scaffold_1061_2
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(140..1174)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JAG4_HALJB id=5102898 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=CG_Pacearch_01
hypothetical protein
hypothetical protein
rifoxyb1_full_scaffold_1061_3
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

1291..1992
DNA (702bp) protein (234aa)
id=5048829 Tax=CG_Pacearch_01
id=5048829 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifoxyb1_full_scaffold_1061_4

Not on your lists


2096..3043
DNA (948bp) protein (316aa)
50S ribosomal protein L3P {ECO:0000313|EMBL:AJS12723.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=5042300 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L3
50S ribosomal protein L3
rifoxyb1_full_scaffold_1061_5
unknown

Not on your lists

3040..3366
DNA (327bp) protein (109aa)

This feature has no annotations

rifoxyb1_full_scaffold_1061_6

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3363..4223
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E203C
50S ribosomal protein L4P {ECO:0000313|EMBL:AJS12724.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L4
50S ribosomal protein L4
rifoxyb1_full_scaffold_1061_7

Not on your lists


4204..4476
DNA (273bp) protein (91aa)
50S ribosomal protein L23P n=3 Tax=Thermococcus RepID=RL23_PYRKO id=5103254 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L23P {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
50S ribosomal protein L23P
50S ribosomal protein L23P
rifoxyb1_full_scaffold_1061_8

Not on your lists


4478..5176
DNA (699bp) protein (233aa)
50S ribosomal protein L2P {ECO:0000313|EMBL:AJS12725.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L2 id=5800061 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L2
50S ribosomal protein L2
DPANN Jill Banfield (11/29/14)
rifoxyb1_full_scaffold_1061_9

Not on your lists


5179..5586
DNA (408bp) protein (136aa)
30S ribosomal protein S19 n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=RS19_METMA
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps19p; 30S ribosomal protein S19
rps19p; 30S ribosomal protein S19
rifoxyb1_full_scaffold_1061_10
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

5588..6205
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Strigamia maritima RepID=T1JEN6_STRMM
Tax=CG_Pacearch_01
rifoxyb1_full_scaffold_1061_11
unknown

Not on your lists

6207..6401
DNA (195bp) protein (65aa)

This feature has no annotations

rifoxyb1_full_scaffold_1061_12

Not on your lists


6423..7109
DNA (687bp) protein (229aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GVU7_9ZZZZ rbh
30S ribosomal protein S3 {ECO:0000313|EMBL:AGT99650.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
30S ribosomal protein S3
30S ribosomal protein S3
rifoxyb1_full_scaffold_1061_13
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

7109..7282
DNA (174bp) protein (58aa)
Tax=CG_Pacearch_01
rifoxyb1_full_scaffold_1061_14

Not on your lists

7282..7578
DNA (297bp) protein (99aa)
Protein translation factor SUI1 homolog n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VQK7_9EURY
Protein translation factor SUI1 homolog {ECO:0000256|HAMAP-Rule:MF_00604, ECO:0000256|PIRNR:PIRNR037511}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
translation initiation factor Sui1
translation initiation factor Sui1
rifoxyb1_full_scaffold_1061_15

Not on your lists


7578..7943
DNA (366bp) protein (122aa)
30S ribosomal protein S17P n=1 Tax=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) RepID=A8ACD1_IGNH4
30S ribosomal protein S17P {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S17
30S ribosomal protein S17
rifoxyb1_full_scaffold_1061_16

Not on your lists


7996..8397
DNA (402bp) protein (134aa)
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=5046849 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rpl14p; 50S ribosomal protein L14P
rpl14p; 50S ribosomal protein L14P
rifoxyb1_full_scaffold_1061_17

Not on your lists


8399..8851
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000372D201
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
Ribosomal protein L24P
Ribosomal protein L24P
rifoxyb1_full_scaffold_1061_18
AR1, Pacearchaeaota, DPANN, Archaea

Not on your lists

8848..9492
DNA (645bp) protein (215aa)
30S ribosomal protein S4e n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TB87_METSL
hypothetical protein Tax=AR1
30S ribosomal protein S4e
30S ribosomal protein S4e
rifoxyb1_full_scaffold_1061_19

Not on your lists


9494..10015
DNA (522bp) protein (174aa)
50S ribosomal protein L5 n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036CFB8D
50S ribosomal protein L5P {ECO:0000313|EMBL:AJS12731.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L5
50S ribosomal protein L5
rifoxyb1_full_scaffold_1061_20

Not on your lists

10017..10247
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO48875.1}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
hypothetical protein; K02954 small subunit ribosomal protein S14 id=5042315 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
hypothetical protein
rifoxyb1_full_scaffold_1061_21

Not on your lists


10268..10648
DNA (381bp) protein (127aa)
30S ribosomal protein S8 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS8_NANEQ
30S ribosomal protein S8 {ECO:0000313|EMBL:AJS12732.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps8p; 30S ribosomal protein S8P
rps8p; 30S ribosomal protein S8P
rifoxyb1_full_scaffold_1061_22
unknown

Not on your lists

10632..10895
DNA (264bp) protein (88aa)

This feature has no annotations

rifoxyb1_full_scaffold_1061_23

Not on your lists


10892..11434
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035F6817
50S ribosomal protein L6P {ECO:0000313|EMBL:AJS12733.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L6
50S ribosomal protein L6
rifoxyb1_full_scaffold_1061_24
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

11431..11805
DNA (375bp) protein (125aa)
Ribosomal protein L32e; K02912 large subunit ribosomal protein L32e Tax=CG_Pacearch_01
rifoxyb1_full_scaffold_1061_25
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

11802..12206
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI00036CDE30
ribosomal protein L19e; K02885 large subunit ribosomal protein L19e Tax=CG_Pacearch_01
rpl19e; 50S ribosomal protein L19
rpl19e; 50S ribosomal protein L19
rifoxyb1_full_scaffold_1061_26

Not on your lists


12203..12697
DNA (495bp) protein (165aa)
50S ribosomal protein L18P n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IBI0_ACIB4
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L18
50S ribosomal protein L18
rifoxyb1_full_scaffold_1061_27
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists


12698..13597
DNA (900bp) protein (300aa)
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 Tax=CG_Pacearch_01
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 id=5041779 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S5
30S ribosomal protein S5
rifoxyb1_full_scaffold_1061_28

Not on your lists


13650..14000
DNA (351bp) protein (117aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO48868.1}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
50S ribosomal protein L30P id=5800042 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L30
50S ribosomal protein L30
rifoxyb1_full_scaffold_1061_29
unknown

Not on your lists

13997..14143
DNA (147bp) protein (49aa)

This feature has no annotations

rifoxyb1_full_scaffold_1061_30

Not on your lists


14140..14649
DNA (510bp) protein (170aa)
50S ribosomal protein L15P n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZE1_METFV id=5103274 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L15P
50S ribosomal protein L15P
Displaying items 1-30 of 33 in total

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