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RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_972

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_972_1
unknown

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3..77
DNA (75bp) protein (25aa)

This feature has no annotations

RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_972_2
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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641..1267
DNA (627bp) protein (209aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_972_3
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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1292..3274
DNA (1983bp) protein (661aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_972_4
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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3284..5035
DNA (1752bp) protein (584aa)
Radical SAM domain-containing protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Radical SAM domain protein id=1870909 bin=GWB2_Proteobacteria_55_19 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
cobalamin B12-binding domain protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_972_5
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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5115..8396
DNA (3282bp) protein (1094aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I2H3_DESAP
multi-sensor signal transduction histidine kinase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
multi-sensor signal transduction histidine kinase
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_972_6
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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8596..8886
DNA (291bp) protein (97aa)
fliN; flagellar motor switch protein flin; K02417 flagellar motor switch protein FliN/FliY Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
CheC, inhibitor of MCP methylation / FliN fusion protein id=1808603 bin=GWD2_RBX1-related_39_127 species=Thermoanaerobacterium thermosaccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
fliN; flagellar motor switch protein flin
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_972_7
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

8893..9192
DNA (300bp) protein (100aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_972_8
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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9321..9926
DNA (606bp) protein (202aa)
Flagellar biosynthesis protein FliP n=1 Tax=Clostridium tetani 12124569 RepID=U6EYK1_CLOTA
fliP; flagellar biosynthesis protein FliP; K02419 flagellar biosynthetic protein FliP Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
fliP; flagellar biosynthesis protein FliP
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_972_9
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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9985..10254
DNA (270bp) protein (90aa)
Flagellar biosynthetic protein FliQ n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HN23_9FIRM
flagellar biosynthetic protein; K02420 flagellar biosynthetic protein FliQ Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
flagellar biosynthetic protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_972_10
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

10257..11039
DNA (783bp) protein (261aa)
flagellar biosynthetic protein FliR Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
fliR; flagellar biosynthesis protein FliR; K02421 flagellar biosynthetic protein FliR id=24608794 bin=RAAC11 species=Brevibacillus sp. BC25 genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
flagellar biosynthetic protein FliR
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_972_11
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

11105..12211
DNA (1107bp) protein (369aa)
flagellar biosynthetic protein FlhB; K02401 flagellar biosynthetic protein FlhB Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Flagellar biosynthetic protein FlhB id=3503875 bin=GWF2_OP9-related_38_17 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
flagellar biosynthetic protein FlhB
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_972_12
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

12224..14308
DNA (2085bp) protein (695aa)
flhA; flagellar biosynthesis protein FlhA; K02400 flagellar biosynthesis protein FlhA Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Flagellar biosynthesis protein FlhA id=1750193 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
flagellar biosynthesis protein FlhA
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_972_13
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

14336..14557
DNA (222bp) protein (74aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_972_14
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

14558..15148
DNA (591bp) protein (197aa)
RNA polymerase sigma factor Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RNA polymerase sigma factor id=1750195 bin=GWE2_RBX1_39_32 species=Eubacterium ventriosum genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_972_15
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists


15545..15898
DNA (354bp) protein (118aa)
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Putative uncharacterized protein id=4795523 bin=GWC2_Nitrospirae-rel_56_14 species=Cesiribacter andamanensis genus=Cesiribacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
30S ribosomal protein S23
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_972_16
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

16096..16404
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F2Y3_SPICH
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_972_17
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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comp(16438..17448)
DNA (1011bp) protein (337aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_972_18
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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comp(17560..19251)
DNA (1692bp) protein (564aa)
Cellodextrinase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Cellodextrinase id=4066210 bin=GWF2_OP9-related_38_17 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
cellodextrinase
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_972_19
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(19382..19549)
DNA (168bp) protein (56aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Displaying 19 items

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