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RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_1
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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5048..5863
DNA (816bp) protein (272aa)
DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
DNA polymerase III, delta prime subunit n=1 Tax=Lactobacillus buchneri (strain NRRL B-30929) RepID=F4FX96_LACBN
DNA polymerase III subunit delta'
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_2
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

5848..6516
DNA (669bp) protein (223aa)
PSP1 domain-containing protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
PSP1 domain protein id=1859346 bin=GWE2_RBX1_39_32 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
PSP1 domain-containing protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_3
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

6513..6857
DNA (345bp) protein (115aa)
Uncharacterized HIT-like protein aq_141 n=2 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=U4QIZ1_TEPAE
Uncharacterized HIT-like protein aq_141 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Uncharacterized HIT-like protein aq_141
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_4
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

6897..7091
DNA (195bp) protein (65aa)
30S ribosomal protein S21 n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HUJ5_9FIRM
30S ribosomal protein S21; K02970 small subunit ribosomal protein S21 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
rpsU; ribosomal protein S21
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_5
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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7088..8164
DNA (1077bp) protein (359aa)
YjgP/YjgQ family permease Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Permease YjgP/YjgQ family protein id=1803902 bin=GWD2_RBX1-related_39_127 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
YjgP/YjgQ family permease
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_6
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

8161..10515
DNA (2355bp) protein (785aa)
SLEI family protein; K12600 superkiller protein 3 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
SLEI family protein; K12600 superkiller protein 3 id=24610697 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RAAC11 organism_group=Unknown_CP
TPR repeats containing protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_7
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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comp(10523..11041)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MR46_9BACT
hypothetical protein; K06966 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_8
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

11260..12549
DNA (1290bp) protein (430aa)
Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T728_PHYPA
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_9
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(12657..15119)
DNA (2463bp) protein (821aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_10
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

15301..16011
DNA (711bp) protein (237aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_11
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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comp(16078..16350)
DNA (273bp) protein (91aa)
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein id=86175 bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_12
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(16360..16953)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EJ03_9BACT
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_13
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

17000..17341
DNA (342bp) protein (114aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_14
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(17564..17752)
DNA (189bp) protein (63aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_15
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(17739..18254)
DNA (516bp) protein (172aa)
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Uncharacterized protein id=3240785 bin=GWA2_Ignavibacteria-rel_35_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_16
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

18365..18976
DNA (612bp) protein (204aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_17
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(18989..21046)
DNA (2058bp) protein (686aa)
glyS; putative glycyl-tRNA synthetase beta subunit (EC:6.1.1.14); K01879 glycyl-tRNA synthetase beta chain [EC:6.1.1.14] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
glyS; putative glycyl-tRNA synthetase beta subunit (EC:6.1.1.14)
Glycine--tRNA ligase beta subunit n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNW5_9FIRM
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_18
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(21088..21951)
DNA (864bp) protein (288aa)
Glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14); K01878 glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14)
Glycine--tRNA ligase alpha subunit id=1750132 bin=GWE2_RBX1_39_32 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_19
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(22107..22856)
DNA (750bp) protein (250aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_20
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(23250..24503)
DNA (1254bp) protein (418aa)
S-layer domain protein domain protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRN4_9FIRM
S-layer protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
S-layer protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_21
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(24642..25472)
DNA (831bp) protein (277aa)
Response regulator receiver protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QD68_DESB2
response regulator receiver protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
response regulator receiver protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_22
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(25648..26130)
DNA (483bp) protein (161aa)
Molybdenum cofactor synthesis domain protein n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ADX5_CARHZ
molybdenum cofactor synthesis domain-containing protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
molybdenum cofactor synthesis domain-containing protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_23
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(26127..26552)
DNA (426bp) protein (142aa)
MOSC domain containing protein n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AKR7_PELPD
MOSC domain-containing protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
MOSC domain-containing protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_24
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(26525..26980)
DNA (456bp) protein (152aa)
moaC; molybdenum cofactor biosynthesis protein C Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Molybdenum cofactor biosynthesis protein C id=4639724 bin=GWF2_Bacteroidetes_43_63 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
moaC; Molybdenum cofactor biosynthesis protein C
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_25
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(27146..27949)
DNA (804bp) protein (268aa)
radical SAM protein; K03639 molybdenum cofactor biosynthesis protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Radical SAM domain protein id=4245381 bin=GWF2_Bacteroidetes_38_335 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
molybdenum cofactor biosynthesis protein MoeA
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_26
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(27933..29111)
DNA (1179bp) protein (393aa)
molybdenum cofactor synthesis domain-containing protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Molybdenum cofactor synthesis domain protein id=2104560 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
molybdenum cofactor synthesis domain-containing protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_27
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(29117..29695)
DNA (579bp) protein (193aa)
ABC-type cobalt transport system, ATPase component n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D549_PELTS
CbiO; ABC-type cobalt transport system, ATPase component; K06857 tungstate transport system ATP-binding protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
CbiO; ABC-type cobalt transport system, ATPase component
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_28
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(29692..30336)
DNA (645bp) protein (215aa)
tungstate ABC transporter permease; K05773 tungstate transport system permease protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Binding-protein-dependent transport systems inner membrane component id=4359227 bin=GWC2_Geobacteraceae_55_20 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
tungstate ABC transporter permease
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_29
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(30329..31189)
DNA (861bp) protein (287aa)
Extracellular solute-binding protein family 1 n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CJU8_DESK7
ABC transporter substrate-binding protein; K05772 tungstate transport system substrate-binding protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
ABC transporter substrate-binding protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1362_30
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(31313..31855)
DNA (543bp) protein (181aa)
Protein FdhD homolog n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MLW4_ALKOO
formate dehydrogenase accessory protein; K02379 FdhD protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
formate dehydrogenase accessory protein
Displaying 30 items

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