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RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_9578

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_9578_1
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

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comp(173..769)
DNA (597bp) protein (199aa)
ruvA; Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
Holliday junction ATP-dependent DNA helicase RuvA n=7 Tax=Clostridium thermocellum RepID=RUVA_CLOTH
ruvA; Holliday junction DNA helicase RuvA
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_9578_2
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

comp(791..1282)
DNA (492bp) protein (164aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CLD6_SYNLT
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_9578_3
unknown

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comp(1427..2593)
DNA (1167bp) protein (389aa)

This feature has no annotations

RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_9578_4
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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comp(2612..5368)
DNA (2757bp) protein (919aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_9578_5
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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comp(5481..6701)
DNA (1221bp) protein (407aa)
major facilitator superfamily protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Gll0083 protein id=3504082 bin=GWF2_OP9-related_38_17 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
major facilitator superfamily protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_9578_6
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(6689..7201)
DNA (513bp) protein (171aa)
DNA repair protein RecO n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFL2_THET1
DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
DNA repair protein RecO
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_9578_7
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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comp(7174..9054)
DNA (1881bp) protein (627aa)
sensor histidine kinase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Putative Histidine kinase, contains GAF domain id=1832772 bin=GWE2_Bacteroidetes_42_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
sensor histidine kinase
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_9578_8
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(9131..9781)
DNA (651bp) protein (217aa)
queuosine biosynthesis protein QueC Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
7-cyano-7-deazaguanine synthase id=2050200 bin=GWB2_CP_45_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
queuosine biosynthesis protein QueC
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_9578_9
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(9794..11071)
DNA (1278bp) protein (426aa)
adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QUK3_ACEAZ
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_9578_10
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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comp(11466..11858)
DNA (393bp) protein (131aa)
transcriptional regulator; K13771 Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
transcriptional regulator
nsrR; HTH-type transcriptional regulator NsrR id=12493232 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_9578_11
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(11862..12158)
DNA (297bp) protein (99aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_9578_12
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(12230..12898)
DNA (669bp) protein (223aa)
phoU; phosphate transport system protein PhoU; K02039 phosphate transport system protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Phosphate uptake regulator id=2288124 bin=GWB2_CP_45_9 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
phoU; phosphate transport system protein PhoU
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_9578_13
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(12920..13723)
DNA (804bp) protein (268aa)
phosphate ABC transporter ATPase; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XC55_9BACT
phosphate ABC transporter ATPase
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_9578_14
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(13728..14483)
DNA (756bp) protein (252aa)
phosphate ABC transporter ATPase (EC:3.6.3.27); K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
phosphate ABC transporter ATPase (EC:3.6.3.27)
Phosphate ABC transporter, ATPase subunit id=3888554 bin=GWF2_Planctomycetes_42_9 species=Methanotorris igneus genus=Methanotorris taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_9578_15
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(14477..15325)
DNA (849bp) protein (283aa)
phosphate ABC transporter permease; K02038 phosphate transport system permease protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Phosphate ABC transporter, inner membrane subunit PstA id=3432151 bin=GWF2_OP3_38_59 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
phosphate ABC transporter permease
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_9578_16
RIFOXYB2_FULL_WOR_1_48_7_curated, WOR-1, Bacteria

Not on your lists

comp(15322..16020)
DNA (699bp) protein (233aa)
ABC-type phosphate transporter permease component ; K02037 phosphate transport system permease protein Tax=RIFOXYB2_FULL_WOR_1_48_7_curated
ABC-type phosphate transporter permease component id=3888556 bin=GWF2_Planctomycetes_42_9 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
ABC-type phosphate transporter permease component
Displaying 16 items

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