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RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_854

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_854_1
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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comp(2..1171)
DNA (1170bp) protein (390aa)
DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A2Z3_NATTJ
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_854_2
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

1509..2171
DNA (663bp) protein (221aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_854_3
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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comp(2325..3008)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Treponema pedis str. T A4 RepID=S6A8Y8_9SPIO
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_854_4
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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comp(3047..5014)
DNA (1968bp) protein (656aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3A8P7_CARHZ
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_854_5
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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comp(5014..5286)
DNA (273bp) protein (91aa)
Putative RNA-binding protein containing Zn ribbon n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K7E7_HALHC
putative RNA-binding protein containing Zn ribbon Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
putative RNA-binding protein containing Zn ribbon
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_854_6
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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comp(5305..6444)
DNA (1140bp) protein (380aa)
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta id=1827161 bin=GWD2_RBX1-related_39_127 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_854_7
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

6591..7697
DNA (1107bp) protein (369aa)
gcvT; glycine cleavage system aminomethyltransferase T; K00605 aminomethyltransferase [EC:2.1.2.10] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Aminomethyltransferase n=3 Tax=Caldanaerobacter subterraneus RepID=GCST_THETN
gcvT; glycine cleavage system aminomethyltransferase T
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_854_8
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

7724..8104
DNA (381bp) protein (127aa)
Glycine cleavage system H protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=GCSH_SYMTH
glycine cleavage system protein H; K02437 glycine cleavage system H protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
glycine cleavage system protein H
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_854_9
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

8104..9288
DNA (1185bp) protein (395aa)
glycine dehydrogenase subunit 1 (EC:1.4.4.2); K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
glycine dehydrogenase; K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2] id=7200503 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
glycine dehydrogenase subunit 1 (EC:1.4.4.2)
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_854_10
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

9372..9908
DNA (537bp) protein (179aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_854_11
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(9930..10730)
DNA (801bp) protein (267aa)
dapF; diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
dapF; putative diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] id=24610360 bin=RAAC11 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
dapF; diaminopimelate epimerase
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_854_12
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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comp(10714..11079)
DNA (366bp) protein (122aa)
6-pyruvoyl-tetrahydropterin synthase (EC:4.2.3.12); K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
6-pyruvoyl-tetrahydropterin synthase (EC:4.2.3.12)
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PD04_DEFDS
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_854_13
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

11242..13239
DNA (1998bp) protein (666aa)
alpha-glucan phosphorylase (EC:2.4.1.1); K00688 starch phosphorylase [EC:2.4.1.1] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
alpha-glucan phosphorylase (EC:2.4.1.1)
Phosphorylase id=3840701 bin=GWF2_OP9_related_35_9 species=Thermotoga thermarum genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_854_14
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(13234..14109)
DNA (876bp) protein (292aa)
glutamate racemase (EC:5.1.1.3); K01776 glutamate racemase [EC:5.1.1.3] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCJ1_GEOUR
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_854_15
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(14106..15254)
DNA (1149bp) protein (383aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28); K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase id=2148161 bin=GWE2_RBX1_39_32 species=unknown genus=Halanaerobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_854_16
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(15244..16575)
DNA (1332bp) protein (444aa)
polyA polymerase family protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
PolyA polymerase family protein id=2557285 bin=GWC1_Spirochaetes_27_15 species=Brachyspira pilosicoli genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
polyA polymerase family protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_854_17
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

16730..17740
DNA (1011bp) protein (337aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_854_18
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

17788..18963
DNA (1176bp) protein (392aa)
GTP-binding protein n=1 Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U2N7_SULKY
GTP-binding protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
GTP-binding protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_854_19
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(18968..20131)
DNA (1164bp) protein (388aa)
Putative group 1 glycosyl transferase n=1 Tax=uncultured archaeon RepID=D1JHD8_9ARCH
group 1 glycosyl transferase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
group 1 glycosyl transferase
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_854_20
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(20128..21015)
DNA (888bp) protein (296aa)
Radical SAM domain protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ETR3_EMTOG
Radical SAM domain protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Radical SAM domain protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_854_21
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(21039..22706)
DNA (1668bp) protein (556aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_854_22
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

22943..23704
DNA (762bp) protein (254aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_854_23
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

23751..24473
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9WYU4_9NOST
Uncharacterized protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
Displaying 23 items

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