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RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327

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Displaying items 1-30 of 49 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_1
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

2..430
DNA (429bp) protein (143aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_2
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

497..1270
DNA (774bp) protein (258aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_3
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

1375..2118
DNA (744bp) protein (248aa)
PROKAR_LIPOPROTEIN Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
PROKAR_LIPOPROTEIN id=5097295 bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_4
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(2631..4037)
DNA (1407bp) protein (469aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E4M5_GEOLS
Fis family two component sigma-54 specific transcriptional regulator Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Fis family two component sigma-54 specific transcriptional regulator
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_5
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(4306..4542)
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-N05 RepID=UPI0003804B2F
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_6
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(4539..4808)
DNA (270bp) protein (90aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_7
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(5261..5494)
DNA (234bp) protein (78aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_8
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(5484..5738)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EGE9_9BACT
Uncharacterized protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_9
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

6021..7028
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XUU3_SORCE
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_10
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(7117..7479)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UM76_9FLAO
Uncharacterized protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_11
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

7584..7925
DNA (342bp) protein (114aa)
regulatory protein ArsR; K03892 ArsR family transcriptional regulator Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Regulatory protein ArsR id=1778323 bin=GWB2_Proteobacteria_55_19 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
regulatory protein ArsR
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_12
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

7909..8487
DNA (579bp) protein (193aa)
methyltransferase type 11 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
methyltransferase type 11 id=124977 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
methyltransferase type 11
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_13
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

8484..8804
DNA (321bp) protein (107aa)
DsrE family protein; K06039 uncharacterized protein involved in oxidation of intracellular sulfur Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Putative uncharacterized protein id=4954738 bin=GWC2_OP3-like_45_7 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
hypothetical protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_14
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(8935..9141)
DNA (207bp) protein (69aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_15
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(9131..10387)
DNA (1257bp) protein (419aa)
exodeoxyribonuclease VII; K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Exodeoxyribonuclease 7 large subunit id=3283929 bin=GWF2_OP3_38_59 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
exodeoxyribonuclease VII
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_16
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(10476..11552)
DNA (1077bp) protein (359aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_17
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(11653..13806)
DNA (2154bp) protein (718aa)
UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI000364DBD7
UvrD/REP helicase
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_18
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

13897..14388
DNA (492bp) protein (164aa)
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
UPF0234 protein DesdiDRAFT_3264 id=1891859 bin=GWE2_RBX1_39_32 species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_19
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(14499..15179)
DNA (681bp) protein (227aa)
alpha/beta hydrolase fold protein; K02170 pimelyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Carboxylesterase BioH n=2 Tax=Neisseria weaveri RepID=G2DMK4_9NEIS
alpha/beta hydrolase fold protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_20
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

15218..16204
DNA (987bp) protein (329aa)
bioB; biotin synthetase (EC:2.8.1.6); K01012 biotin synthetase [EC:2.8.1.6] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Biotin synthase (EC:2.8.1.6)
Biotin synthase id=2087116 bin=GWE2_RBX1_39_32 species=Phascolarctobacterium succinatutens genus=Phascolarctobacterium taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_21
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

16290..17333
DNA (1044bp) protein (348aa)
Signal transduction histidine kinase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XP92_METZD
signal transduction histidine kinase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
signal transduction histidine kinase
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_22
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

17424..18347
DNA (924bp) protein (308aa)
malate dehydrogenase; K00024 malate dehydrogenase [EC:1.1.1.37] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
malate dehydrogenase n=1 Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B36BF8
malate dehydrogenase
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_23
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

18326..19162
DNA (837bp) protein (279aa)
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha (EC:4.2.1.2); K01677 fumarate hydratase subunit alpha [EC:4.2.1.2] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha (EC:4.2.1.2)
Fumarase n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B7A5_CLOBO
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_24
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

19159..19710
DNA (552bp) protein (184aa)
hydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit beta; K01678 fumarate hydratase subunit beta [EC:4.2.1.2] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit n=1 Tax=Thermocrinis albus (strain DSM 14484 / JCM 11386 / HI 11/12) RepID=D3SLU7_THEAH
hydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit beta
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_25
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

19715..20656
DNA (942bp) protein (314aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_26
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

20656..20874
DNA (219bp) protein (73aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_27
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

20878..21393
DNA (516bp) protein (172aa)
Predicted hydrolase of the HAD superfamily n=2 Tax=Caldanaerobacter subterraneus RepID=Q8RAG3_THETN
HAD superfamily hydrolase; K07015 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
HAD superfamily hydrolase
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_28
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(21443..22288)
DNA (846bp) protein (282aa)
id=4180432 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
id=4180432 bin=GWF2_OP9_related_35_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_29
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

22420..23607
DNA (1188bp) protein (396aa)
S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthetase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E3013B
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_327_30
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(23624..26377)
DNA (2754bp) protein (918aa)
5'-nucleotidase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Putative uncharacterized protein id=2287911 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
5'-nucleotidase
Displaying items 1-30 of 49 in total

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