ggKbase home page

RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1187

Search features with annotation key words

Displaying 17 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1187_1
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

comp(3..287)
DNA (285bp) protein (95aa)
hydrogenase, membrane subunit 3-like protein (EchB-like) Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
Formate hydrogenlyase subunit 4 id=3642135 bin=GWA2_Elusimicrobia_51_34 species=Desulfosporosinus orientis genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
respiratory-chain NADH dehydrogenase subunit 1
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1187_2
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

comp(290..2149)
DNA (1860bp) protein (620aa)
hyfB; formate hydrogenlyase, membrane subunit Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit id=3642136 bin=GWA2_Elusimicrobia_51_34 species=Desulfosporosinus orientis genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
hyfB; formate hydrogenlyase, membrane subunit
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1187_3
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

2234..3790
DNA (1557bp) protein (519aa)
putative alpha-isopropylmalate/homocitrate synthase family transferase; K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI0003731307
putative alpha-isopropylmalate/homocitrate synthase family transferase
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1187_4
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

3794..4258
DNA (465bp) protein (155aa)
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamin-phosphate pyrophosphorylase n=1 Tax=Campylobacter concisus UNSWCS RepID=U2F126_9PROT
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1187_5
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

4330..5622
DNA (1293bp) protein (431aa)
diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Diaminopimelate decarboxylase n=2 Tax=Thermoanaerobacter RepID=I9AC53_9THEO
diaminopimelate decarboxylase
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1187_6
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

5888..6712
DNA (825bp) protein (275aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1187_7
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

6714..7661
DNA (948bp) protein (316aa)
Putative uncharacterized protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Putative uncharacterized protein id=5800726 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1187_8
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

7669..8580
DNA (912bp) protein (304aa)
id=2150684 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
id=2150684 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1187_9
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

8583..10184
DNA (1602bp) protein (534aa)
phage-like protein gp255; K01939 adenylosuccinate synthase [EC:6.3.4.4] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Adenylosuccinate synthetase id=2150682 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
phage-like protein gp255
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1187_10
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

10376..11362
DNA (987bp) protein (329aa)
Ni/Fe hydrogenase subunit beta Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Ni/Fe hydrogenase beta subunit id=2433045 bin=GWF1_Spirochaetes_51_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
Ni/Fe hydrogenase subunit beta
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1187_11
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

11362..12198
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00037788F4
oxidoreductase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
oxidoreductase
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1187_12
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

12200..12952
DNA (753bp) protein (251aa)
cytochrome B n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI0003786DEF
nickel-dependent hydrogenase, small chain Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
nickel-dependent hydrogenase, small chain
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1187_13
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

12945..14270
DNA (1326bp) protein (442aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000361E493
nickel-dependent hydrogenase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
nickel-dependent hydrogenase
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1187_14
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

14248..14745
DNA (498bp) protein (166aa)
Ni,Fe-hydrogenase maturation factor; K08315 hydrogenase 3 maturation protease [EC:3.4.23.51] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00035EE39B
Ni,Fe-hydrogenase maturation factor
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1187_15
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

14724..14966
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B4036D
hypA; hydrogenase expression/formation protein (HypA); K04651 hydrogenase nickel incorporation protein HypA/HybF Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypA; hydrogenase expression/formation protein (hypA)
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1187_16
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

15089..16417
DNA (1329bp) protein (443aa)
Radical SAM domain-containing protein; K01012 biotin synthetase [EC:2.8.1.6] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Similar to biotin synthase id=2433058 bin=GWF1_Spirochaetes_51_8 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
Radical SAM domain-containing protein
RIFOXYB2_FULL_CP_36_35_rifoxyb2_full_scaffold_1187_17
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

16510..16890
DNA (381bp) protein (127aa)
Thiamine biosynthesis protein ThiH n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A7K4_MELRP
thiH; thiamine biosynthesis protein ThiH; K03150 thiamine biosynthesis ThiH Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
thiamine biosynthesis protein ThiH
Displaying 17 items

View Taxonomy