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RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955

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Displaying items 1-30 of 54 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_1
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

1..204
DNA (204bp) protein (68aa)
Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_2
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

comp(206..1207)
DNA (1002bp) protein (334aa)
Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_3
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

comp(1353..2999)
DNA (1647bp) protein (549aa)
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase id=2283908 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_4
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

3096..4652
DNA (1557bp) protein (519aa)
peptidase; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
Metallopeptidase, M20/M25/M40 family n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=Q9V0C1_PYRAB
peptidase
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_5
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

4752..5237
DNA (486bp) protein (162aa)
Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_6
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

5319..6053
DNA (735bp) protein (245aa)
PROKAR_LIPOPROTEIN Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
PROKAR_LIPOPROTEIN id=5097295 bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_7
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

6057..7097
DNA (1041bp) protein (347aa)
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=4 Tax=Thermoanaerobacter RepID=AROC_THEPX
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_8
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists


7162..7593
DNA (432bp) protein (144aa)
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
30S ribosomal protein S16 id=3524821 bin=GWF2_OP9_related_35_9 species=Ornithobacterium rhinotracheale genus=Ornithobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
30S ribosomal protein S16
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_9
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

7608..7850
DNA (243bp) protein (81aa)
RNA-binding protein (KH domain) Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
UPF0109 protein CcarbDRAFT_1215 id=1764504 bin=GWE2_RBX1_39_32 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RNA-binding protein (KH domain)
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_10
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

7851..8285
DNA (435bp) protein (145aa)
hypothetical protein Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
Putative uncharacterized protein id=1764505 bin=GWE2_RBX1_39_32 species=Stanieria cyanosphaera genus=Stanieria taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_11
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

8372..9109
DNA (738bp) protein (246aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=TRMD_DICTD
trmD; tRNA (guanine-N(1)-)-methyltransferase
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_12
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

9106..9648
DNA (543bp) protein (181aa)
Putative uncharacterized protein n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QRM8_ACEAZ
hypothetical protein Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
hypothetical protein
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_13
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists


9688..10041
DNA (354bp) protein (118aa)
50S ribosomal protein L19 n=1 Tax=Caloramator australicus RC3 RepID=I7LH43_9CLOT
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
rplS; 50S ribosomal protein L19
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_14
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

10045..10704
DNA (660bp) protein (220aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
Signal peptidase I n=1 Tax=Thermanaerovibrio velox DSM 12556 RepID=H0UPM4_9BACT
signal peptidase I
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_15
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

10765..11376
DNA (612bp) protein (204aa)
rnhB; ribonuclease HII RnhB (EC:3.1.26.4) Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
rnhB; ribonuclease HII RnhB (EC:3.1.26.4)
ribonuclease HII n=1 Tax=Desulfobacter curvatus RepID=UPI00037A18A5
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_16
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

11441..11713
DNA (273bp) protein (91aa)
histone-like DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
DNA-binding protein HU-beta id=4195334 bin=GWF2_OP9_related_35_9 species=Providencia rustigianii genus=Providencia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
histone family protein DNA-binding protein
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_17
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

11783..12409
DNA (627bp) protein (209aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S1K0_DESTD
putative dTDP-4-deoxyrhamnose 3,5 epimerase
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_18
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

12458..14278
DNA (1821bp) protein (607aa)
AsmA family protein; K07289 AsmA protein Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
hypothetical protein id=7201355 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
AsmA family protein
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_19
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

14472..15182
DNA (711bp) protein (237aa)
Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_20
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

comp(15188..16804)
DNA (1617bp) protein (539aa)
phosphoglycerate mutase (EC:5.4.2.1); K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K635_9FIRM
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_21
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

comp(16913..19459)
DNA (2547bp) protein (849aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI000371E967
Na-Ca exchanger/integrin-beta4 Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
hypothetical protein
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_22
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

comp(19484..20524)
DNA (1041bp) protein (347aa)
Putative uncharacterized protein n=1 Tax=Candidatus Regiella insecticola R5.15 RepID=G2GXE1_9ENTR
hypothetical protein Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
hypothetical protein
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_23
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

comp(20632..21330)
DNA (699bp) protein (233aa)
Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_24
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

comp(21344..21727)
DNA (384bp) protein (128aa)
hypothetical protein Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
Tetratricopeptide TPR_1 repeat-containing protein id=1985235 bin=GWE2_RBX1_39_32 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_25
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

21899..22744
DNA (846bp) protein (282aa)
hypothetical protein Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
Hypothetical membrane protein id=3179345 bin=GWF2_OP9-related_38_17 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
hypothetical protein
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_26
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

comp(22739..23878)
DNA (1140bp) protein (380aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Thermincola potens (strain JR) RepID=D5XF01_THEPJ
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_27
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

23976..24467
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Cohnella laeviribosi RepID=UPI00036E72E5
hypothetical protein Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
hypothetical protein
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_28
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

24496..25701
DNA (1206bp) protein (402aa)
MiaB-like tRNA modifying protein YliG; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=RIMO_DESRM
MiaB-like tRNA modifying protein YliG
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_29
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

25734..26186
DNA (453bp) protein (151aa)
pgsA; cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PSE6_CLOSD
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_955_30
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

26170..26727
DNA (558bp) protein (186aa)
Putative competence-damage inducible protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSE4_9FIRM
competence/damage-inducible protein CinA; K03742 competence/damage-inducible protein CinA Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
competence/damage-inducible protein CinA
Displaying items 1-30 of 54 in total

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