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RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_772

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_772_1
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

2..379
DNA (378bp) protein (126aa)
Fic family protein Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
Fic family protein id=1992687 bin=GWD2_RBX1-related_39_127 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_772_2
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

comp(938..1324)
DNA (387bp) protein (129aa)
Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_772_3
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists


comp(1559..4294)
DNA (2736bp) protein (912aa)
valyl-tRNA synthetase (EC:6.1.1.9) Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F9H9_DESDL
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_772_4
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

comp(4355..5389)
DNA (1035bp) protein (345aa)
Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_772_5
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

comp(5449..6390)
DNA (942bp) protein (314aa)
Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_772_6
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

comp(6552..7484)
DNA (933bp) protein (311aa)
hypothetical protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1] Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
Putative uncharacterized protein id=4328470 bin=GWF2_Ignavibacteria_35_20 species=unknown genus=Legionella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_772_7
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

comp(7481..7792)
DNA (312bp) protein (104aa)
hypothetical protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1] Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
HipA N-terminal domain protein id=3644299 bin=GWA2_Bacteroidetes_33_15 species=Muricauda ruestringensis genus=Muricauda taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_33_15 organism_group=Bacteroidetes
hypothetical protein
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_772_8
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

comp(7794..8078)
DNA (285bp) protein (95aa)
helix-turn-helix domain-containing protein Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
Helix-turn-helix domain protein id=2037261 bin=GWD2_Bacteroidetes_33_33 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
helix-turn-helix domain-containing protein
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_772_9
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

8483..9547
DNA (1065bp) protein (355aa)
filamentation induced by cAMP protein fic Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
Filamentation induced by cAMP protein Fic id=4185594 bin=GWF2_OP3_43_52 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
filamentation induced by cAMP protein fic
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_772_10
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

9681..9875
DNA (195bp) protein (65aa)
Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_772_11
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

comp(10064..10891)
DNA (828bp) protein (276aa)
Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_772_12
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

comp(10935..11165)
DNA (231bp) protein (77aa)
Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_772_13
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

11218..11529
DNA (312bp) protein (104aa)
DNA polymerase subunit beta Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
DNA polymerase beta domain protein region id=4527463 bin=GWF2_OP9_related_35_9 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
DNA polymerase subunit beta
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_772_14
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

11516..11890
DNA (375bp) protein (125aa)
HEPN domain-containing protein Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
HEPN domain protein id=4527466 bin=GWF2_OP9_related_35_9 species=Caldicellulosiruptor lactoaceticus genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
HEPN domain-containing protein
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_772_15
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists


11909..12928
DNA (1020bp) protein (340aa)
glycoprotease family metalloendopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
glycoprotease family metalloendopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Thermincola potens (strain JR) RepID=D5XCH2_THEPJ
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_772_16
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

12991..14277
DNA (1287bp) protein (429aa)
histidine kinase Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
Integral membrane sensor signal transduction histidine kinase id=2482659 bin=GWC2_Deltaproteobacteria_42_51 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
histidine kinase
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_772_17
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

14292..14570
DNA (279bp) protein (93aa)
gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
glutamyl-tRNA amidotransferase subunit C n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI000369530B
gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_772_18
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

14567..16009
DNA (1443bp) protein (481aa)
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:3.5.1.4); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:3.5.1.4)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DPK2_DESRL
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_772_19
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

16159..17610
DNA (1452bp) protein (484aa)
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-); K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=RIFOXYB2_FULL_WOR_1_37_13_curate
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=GATB_CARHZ
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_772_20
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

17610..18224
DNA (615bp) protein (205aa)
Radical SAM domain protein n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RZC9_THEOJ
radical SAM protein Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
radical SAM protein
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_772_21
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

comp(18221..20356)
DNA (2136bp) protein (712aa)
radical SAM domain protein Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
radical SAM domain protein id=128413 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_772_22
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

comp(20353..21351)
DNA (999bp) protein (333aa)
Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_772_23
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

comp(21490..22293)
DNA (804bp) protein (268aa)
diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase id=2018540 bin=GWE2_RBX1_39_32 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RIFOXYB2_FULL_CP_37_13_rifoxyb2_full_scaffold_772_24
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

22365..22874
DNA (510bp) protein (170aa)
Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
Displaying 24 items

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