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RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244

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Displaying items 1-30 of 53 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_1
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(73..1335)
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0002F9D4BC
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_2
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(1307..2044)
DNA (738bp) protein (246aa)
hypothetical protein; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein n=1 Tax=Hippea alviniae RepID=UPI0003B437E3
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_3
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(2041..3198)
DNA (1158bp) protein (386aa)
acetolactate synthase, large subunit; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=D9YCC7_9DELT
2-oxoacid decarboxylase/dehydrogenase/transferase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_4
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(3198..3716)
DNA (519bp) protein (173aa)
ilvB; acetolactate synthase isozyme I, large subunit; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
TPP-dependent enzyme involved in flagella modificaiton n=1 Tax=Shewanella oneidensis (strain MR-1) RepID=Q8EC82_SHEON
TPP-dependent enzyme involved in flagella modificaiton
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_5
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(3720..4763)
DNA (1044bp) protein (348aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_6
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(4768..6684)
DNA (1917bp) protein (639aa)
Uncharacterized protein n=1 Tax=Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1) RepID=C7RDN0_ANAPD
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_7
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(6723..8036)
DNA (1314bp) protein (438aa)
class III aminotransferase (EC:5.4.3.8); K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
class III aminotransferase (EC:5.4.3.8)
Aminotransferase id=4103719 bin=GWF2_Lentisphaerae_57_35 species=Nitrobacter winogradskyi genus=Nitrobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_8
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(8054..9055)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XP36_DESMR
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_9
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(9052..9996)
DNA (945bp) protein (315aa)
Oxidoreductase, aldo/keto reductase family n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A5H0_PELCD
oxidoreductase, aryl-alcohol dehydrogenase-like Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
oxidoreductase, aldo/keto reductase family
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_10
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(9998..10711)
DNA (714bp) protein (238aa)
acylneuraminate cytidylyltransferase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Acylneuraminate cytidylyltransferase id=2009743 bin=GWB2_Proteobacteria_55_19 species=Eubacterium limosum genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
acylneuraminate cytidylyltransferase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_11
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(10762..11760)
DNA (999bp) protein (333aa)
N-acetylneuraminate synthase (EC:2.5.1.57); K01654 N-acetylneuraminate synthase [EC:2.5.1.56] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
N-acetylneuraminate synthase (EC:2.5.1.57)
N-acetylneuraminate synthase id=4574126 bin=GWC2_Deltaproteobacteria_55_46 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_12
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(11757..12716)
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI0003829744
NAD-dependent epimerase/dehydratase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
NAD-dependent epimerase/dehydratase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_13
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(12713..14020)
DNA (1308bp) protein (436aa)
TuaD protein; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Nucleotide sugar dehydrogenase id=4225797 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
nucleotide sugar dehydrogenase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_14
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(14017..15165)
DNA (1149bp) protein (383aa)
UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZYZ8_MAHA5
UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_15
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(15150..16142)
DNA (993bp) protein (331aa)
N-acetyl glucosamine/N-acetyl galactosamine epimerase n=1 Tax=Caldibacillus debilis RepID=UPI00037605F0
UDP-N-acetylglucosamine 4,6-dehydratase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
UDP-N-acetylglucosamine 4,6-dehydratase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_16
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(16154..17263)
DNA (1110bp) protein (370aa)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PPL0_DESSD
UDP-N-acetylglucosamine 2-epimerase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
UDP-N-acetylglucosamine 2-epimerase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_17
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(17263..18405)
DNA (1143bp) protein (381aa)
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8RC02_THETN
WecE; cell wall biogenesis regulatory protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
WecE; cell wall biogenesis regulatory protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_18
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(18357..18929)
DNA (573bp) protein (191aa)
UDP-D-GlcNAc3NA acetyltransferase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AMF7_IGNAJ
wbpD; UDP-D-GlcNAc3NA acetyltransferase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
wbpD; UDP-D-GlcNAc3NA acetyltransferase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_19
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(18916..19938)
DNA (1023bp) protein (341aa)
Oxidoreductase protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LI73_9BACT
oxidoreductase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
oxidoreductase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_20
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(19940..21244)
DNA (1305bp) protein (435aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22); K13015 UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.-] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase n=1 Tax=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) RepID=B9MRN4_CALBD
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_21
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(21318..21542)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI000377BA09
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_22
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(21639..21908)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Treponema bryantii RepID=UPI0003B330C0
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_23
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(22147..22527)
DNA (381bp) protein (127aa)
Nucleotidyltransferase substrate binding protein, HI0074 family n=1 Tax=Thermus thermophilus JL-18 RepID=H9ZTF6_THETH
nucleotidyltransferase substrate binding protein, HI0074 family Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
nucleotidyltransferase substrate binding protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_24
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(22517..22828)
DNA (312bp) protein (104aa)
DNA polymerase beta domain protein region n=1 Tax=Sulfurihydrogenibium sp. (strain YO3AOP1) RepID=B2V695_SULSY
DNA polymerase beta domain-containing protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
DNA polymerase beta domain-containing protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_25
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(23032..23409)
DNA (378bp) protein (126aa)
winged helix family two component transcriptional regulator; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Two component transcriptional regulator, winged helix family id=2050230 bin=GWB2_CP_45_9 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
winged helix family two component transcriptional regulator
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_26
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(23402..24763)
DNA (1362bp) protein (454aa)
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3) Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3)
hypothetical protein id=8266645 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_27
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(25398..25733)
DNA (336bp) protein (112aa)
Histidine triad (HIT) protein n=1 Tax=Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1) RepID=C7RDC6_ANAPD
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
histidine triad (HIT) protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_28
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(25794..27437)
DNA (1644bp) protein (548aa)
S-layer domain-containing protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Tetratricopeptide TPR_1 repeat-containing protein id=2143561 bin=GWD2_RBX1-related_39_127 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
S-layer domain-containing protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_29
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

27598..29418
DNA (1821bp) protein (607aa)
Elongation factor 4 n=7 Tax=Clostridium thermocellum RepID=LEPA_CLOTH
GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
GTP-binding protein LepA
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_244_30
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

29415..30566
DNA (1152bp) protein (384aa)
coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BDN8_CLOBO
coproporphyrinogen III oxidase
Displaying items 1-30 of 53 in total

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