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RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_2032

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_2032_1
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

137..1483
DNA (1347bp) protein (449aa)
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Uncharacterized protein id=2009293 bin=GWB2_Proteobacteria_55_19 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_2032_2
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(1493..2005)
DNA (513bp) protein (171aa)
KilA-N, DNA-binding domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SPS4_9DELT
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_2032_3
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(2101..2334)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Cecembia lonarensis LW9 RepID=K1L005_9BACT
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_2032_4
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(2353..2484)
DNA (132bp) protein (44aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_2032_5
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(2502..4028)
DNA (1527bp) protein (509aa)
transcriptional regulator Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
transcriptional regulator id=14430526 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ATP-dependent protease
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_2032_6
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(4045..4413)
DNA (369bp) protein (123aa)
UPF0102 protein Despr_2383 n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RIU7_DESPD
hypothetical protein; K07460 putative endonuclease Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_2032_7
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists


4611..5108
DNA (498bp) protein (166aa)
30S ribosomal protein S23 Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Putative uncharacterized protein id=4716599 bin=GWA2_OP3_53_43 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
30S ribosomal protein S23
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_2032_8
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(5321..5593)
DNA (273bp) protein (91aa)
DNA-binding protein HU-beta; K03530 DNA-binding protein HU-beta Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
DNA-binding protein HU-beta id=4195334 bin=GWF2_OP9_related_35_9 species=Providencia rustigianii genus=Providencia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
DNA-binding protein HU-beta
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_2032_9
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(5692..6096)
DNA (405bp) protein (135aa)
lepB; signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
lepB; signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YFD3_DICT6
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_2032_10
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists


comp(6215..6607)
DNA (393bp) protein (131aa)
50S ribosomal protein L19 n=1 Tax=Caloramator australicus RC3 RepID=I7LH43_9CLOT
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
rplS; 50S ribosomal protein L19
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_2032_11
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(6618..7172)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K904_HALHC
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_2032_12
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(7165..7896)
DNA (732bp) protein (244aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8EIP2_9FIRM
trmD; tRNA (guanine-N(1)-)-methyltransferase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_2032_13
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(7930..8355)
DNA (426bp) protein (142aa)
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein id=24609605 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=RAAC11 organism_group=Unknown_CP
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_2032_14
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(8382..8636)
DNA (255bp) protein (85aa)
KH domain-containing RNA-binding protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
UPF0109 protein CcarbDRAFT_1215 id=1764504 bin=GWE2_RBX1_39_32 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
KH domain-containing RNA-binding protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_2032_15
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists


comp(8633..9025)
DNA (393bp) protein (131aa)
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
30S ribosomal protein S16 id=3524821 bin=GWF2_OP9_related_35_9 species=Ornithobacterium rhinotracheale genus=Ornithobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
30S ribosomal protein S16
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_2032_16
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(9084..10121)
DNA (1038bp) protein (346aa)
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=4 Tax=Thermoanaerobacter RepID=AROC_THEPX
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_2032_17
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(10164..11444)
DNA (1281bp) protein (427aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Displaying 17 items

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