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RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177

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Displaying items 1-30 of 51 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_1
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

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2..1504
DNA (1503bp) protein (501aa)
algC; phosphomannomutase/phosphoglucomutase (EC:5.4.2.8); K01840 phosphomannomutase [EC:5.4.2.8] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
algC; phosphomannomutase (EC:5.4.2.8)
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I id=2110062 bin=GWD2_RBX1-related_39_127 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_2
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(1472..2743)
DNA (1272bp) protein (424aa)
DNA-binding protein n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B48A3C
two component system response regulator, sigma54-specific Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
two component system response regulator, sigma54-specific
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_3
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(2751..6011)
DNA (3261bp) protein (1087aa)
multi-sensor signal transduction histidine kinase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
multi-sensor signal transduction histidine kinase id=14626871 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
multi-sensor signal transduction histidine kinase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_4
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(6067..8427)
DNA (2361bp) protein (787aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_5
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(8496..10283)
DNA (1788bp) protein (596aa)
Radical SAM domain protein n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZYF1_DESOH
radical SAM domain-containing protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
radical SAM domain-containing protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_6
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(10462..11205)
DNA (744bp) protein (248aa)
nucleotidyl transferase; K11528 UDP-N-acetylglucosamine pyrophosphorylase [EC:2.7.7.23] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Nucleotidyl transferase n=1 Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3EFC0_CHLL2
nucleotidyl transferase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_7
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

11253..11819
DNA (567bp) protein (189aa)
Metal dependent phosphohydrolase n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GLP9_EUBLK
metal dependent phosphohydrolase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
metal dependent phosphohydrolase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_8
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

11816..12724
DNA (909bp) protein (303aa)
cell envelope-related transcriptional attenuator Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Cell envelope-related transcriptional attenuator id=1973893 bin=GWE2_RBX1_39_32 species=Thermanaerovibrio acidaminovorans genus=Thermanaerovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
cell envelope-related transcriptional attenuator
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_9
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

13392..16079
DNA (2688bp) protein (896aa)
ppdK; pyruvate phosphate dikinase (EC:2.7.9.1); K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Pyruvate, phosphate dikinase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XP69_9BACT
ppdK; pyruvate phosphate dikinase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_10
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

16196..17089
DNA (894bp) protein (298aa)
deoxyguanosinetriphosphate triphosphohydrolase-like protein; K01129 dGTPase [EC:3.1.5.1] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=2 Tax=Clostridiales RepID=R5TKA8_9FIRM
deoxyguanosinetriphosphate triphosphohydrolase-like protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_11
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

17092..18840
DNA (1749bp) protein (583aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
DNA primase n=1 Tax=Thermincola potens (strain JR) RepID=D5XA12_THEPJ
DNA primase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_12
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

19055..20107
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI0003610D84
RpoD family RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RNA polymerase, sigma 70 subunit, rpod subfamily
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_13
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(20088..20792)
DNA (705bp) protein (235aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_14
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

21136..22947
DNA (1812bp) protein (604aa)
ABC transporter ATP-binding protein/permease; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
ABC transporter, ATP-binding protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8FCK4_9DELT
ABC transporter ATP-binding protein/permease
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_15
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

23038..24060
DNA (1023bp) protein (341aa)
anthranilate phosphoribosyltransferase; K00766 anthranilate phosphoribosyltransferase [EC:2.4.2.18] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Anthranilate phosphoribosyltransferase n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BD09_METIK
anthranilate phosphoribosyltransferase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_16
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

24036..24758
DNA (723bp) protein (241aa)
ABC-type (unclassified) transport system, ATPase component Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Putative ABC transporter ATP-binding protein id=2966875 bin=GWF2_OP9_related_35_9 species=Selenomonas ruminantium genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
ABC-type (unclassified) transport system, ATPase component
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_17
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

24759..25850
DNA (1092bp) protein (364aa)
YjgP/YjgQ family permease Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Permease YjgP/YjgQ family protein id=1960263 bin=GWD2_RBX1-related_39_127 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
YjgP/YjgQ family permease
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_18
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

25850..26839
DNA (990bp) protein (330aa)
Protein of unknown function (DUF3084) Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein id=48955 bin=ACD39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown
Protein of unknown function (DUF3084)
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_19
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

26836..27237
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0KDZ9_HALHC
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_20
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

27273..27722
DNA (450bp) protein (150aa)
GatB/Yqey domain protein; K09117 hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Uncharacterized protein yqeY id=4614241 bin=GWF2_OP9_related_35_9 species=Parachlamydia acanthamoebae genus=Parachlamydia taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
GatB/Yqey domain protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_21
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

27739..28098
DNA (360bp) protein (120aa)
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Putative uncharacterized protein id=1843424 bin=GWB2_Proteobacteria_55_19 species=Synechococcus sp. PCC 7335 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_22
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

28103..29428
DNA (1326bp) protein (442aa)
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Dihydrolipoyl dehydrogenase n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DKX3_DESRL
dihydrolipoamide dehydrogenase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_23
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(29448..30434)
DNA (987bp) protein (329aa)
glycosyl transferase family protein; K02843 heptosyltransferase II [EC:2.4.-.-] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Heptosyltransferase II n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AKB3_IGNAJ id=5103416 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Heptosyltransferase II
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_24
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

30453..31862
DNA (1410bp) protein (470aa)
dolichyl-phosphate beta-D-mannosyltransferase (EC:2.4.1.83); K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
dolichyl-phosphate beta-D-mannosyltransferase (EC:2.4.1.83)
Dolichyl-phosphate-mannose-protein mannosyltransferase id=3626246 bin=GWF2_OP9_related_35_9 species=Sulfurimonas gotlandica genus=Sulfurimonas taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_25
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

31877..32557
DNA (681bp) protein (227aa)
dolichol-phosphate mannosyltransferase; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
dolichol-phosphate mannosyltransferase
Dolichyl-phosphate beta-D-mannosyltransferase id=3947538 bin=GWF2_OP9_related_35_9 species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_26
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

32548..33942
DNA (1395bp) protein (465aa)
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Dolichyl-phosphate-mannose-protein mannosyltransferase id=3626246 bin=GWF2_OP9_related_35_9 species=Sulfurimonas gotlandica genus=Sulfurimonas taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_27
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

34056..34892
DNA (837bp) protein (279aa)
glycosyl transferase family protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Glycosyl transferase family 2 id=1959872 bin=GWE2_RBX1_39_32 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
glycosyl transferase family protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_28
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists


34900..35157
DNA (258bp) protein (86aa)
50S ribosomal protein L31 n=1 Tax=Paenibacillus sp. P22 RepID=T2M0M4_9BACL
50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
50S ribosomal protein L31
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_29
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

35179..36255
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B6127D
peptide chain release factor 1; K02835 peptide chain release factor 1 Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
peptide chain release factor 1
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_177_30
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

36257..37108
DNA (852bp) protein (284aa)
[protein release factor]-glutamine N5-methyltransferase (EC:2.1.1.-) Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
[protein release factor]-glutamine N5-methyltransferase (EC:2.1.1.-)
restriction endonuclease HemK n=1 Tax=Megamonas rupellensis RepID=UPI000376DA23
Displaying items 1-30 of 51 in total

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