ggKbase home page

RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_1342

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_1342_1
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(110..1201)
DNA (1092bp) protein (364aa)
alanine racemase; K01775 alanine racemase [EC:5.1.1.1] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RZ90_THEOJ
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_1342_2
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(1170..2003)
DNA (834bp) protein (278aa)
PHP domain protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CHC6_DESK7
PHP domain-containing protein; K07053 Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
PHP domain-containing protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_1342_3
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(2048..2656)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K3T5_CLOBU
Uncharacterized protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_1342_4
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(2723..3406)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LRL4_TEPAE
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_1342_5
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(3390..3884)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E2P0_DICTD
hypothetical protein; K09765 hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_1342_6
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(4029..4916)
DNA (888bp) protein (296aa)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KNV9_9FIRM
dihydrodipicolinate synthase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
dihydrodipicolinate synthase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_1342_7
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

5190..6161
DNA (972bp) protein (324aa)
acetyl-CoA synthase subunit gamma n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2F073
putative corrinoidprotein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
putative corrinoidprotein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_1342_8
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

6137..6436
DNA (300bp) protein (100aa)
Ferredoxin Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Dissimilatory sulfite reductase (Desulfoviridin), alpha/beta subunit id=2995534 bin=GWF2_Bacteroidetes_35_48 species=Desulfosporosinus youngiae genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
ferredoxin
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_1342_9
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(6433..6903)
DNA (471bp) protein (157aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Aeromonas veronii AMC34 RepID=K1IRK3_9GAMM
Prepilin-type N-terminal cleavage/methylation domain-containing protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_1342_10
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(6963..8978)
DNA (2016bp) protein (672aa)
UvrABC system protein B n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LVM0_CLOCD
Excinuclease ABC subunit B; K03702 excinuclease ABC subunit B Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Excinuclease ABC subunit B
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_1342_11
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(9017..9994)
DNA (978bp) protein (326aa)
Ser/Thr kinase family protein (EC:2.7.1.-) Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Ser/Thr kinase family protein (EC:2.7.1.-)
Serine/threonine kinase family protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FIX8_STIAD
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_1342_12
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

10181..10591
DNA (411bp) protein (137aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_1342_13
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

10828..10986
DNA (159bp) protein (53aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_1342_14
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(11043..11387)
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8M3_PALPW
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_1342_15
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(11377..12180)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00036D9661
helix-turN-helix domain protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
helix-turn-helix domain-containing protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_1342_16
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(12520..12861)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI00037637C8
filamentation induced by cAMP protein fic Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
filamentation induced by cAMP protein fic
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_1342_17
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(13112..13633)
DNA (522bp) protein (174aa)
Lipocalin family protein; K03098 outer membrane lipoprotein Blc Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Lipocalin family protein id=4318879 bin=GWF2_Bacteroidetes_42_66 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
lipocalin
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_1342_18
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(13668..14639)
DNA (972bp) protein (324aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DMC0_9GAMM
atoC_[H]; Response regulator of zinc sigma-54-dependent two-component system Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
acetoacetate metabolism regulatory protein AtoC
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_1342_19
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

14834..15553
DNA (720bp) protein (240aa)
signal transduction histidine kinase, nitrogen specific, NtrB (EC:2.7.13.3); K07709 two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3); K10819 histidine kinase id=1250136 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
signal transduction histidine kinase, nitrogen specific, NtrB (EC:2.7.13.3)
Displaying 19 items

View Taxonomy