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RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128

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Displaying items 1-30 of 70 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_1
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(1..1224)
DNA (1224bp) protein (408aa)
restriction modification system DNA specificity domain-containing protein; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Type I restriction-modification system, S subunit/Type I restriction modification DNA specificity n=1 Tax=uncultured bacterium RepID=K1ZJJ3_9BACT
restriction modification system DNA specificity domain-containing protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_2
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(1221..2450)
DNA (1230bp) protein (410aa)
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Putative uncharacterized protein id=4267702 bin=GWC2_OP3-like_45_7 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_3
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(2447..3259)
DNA (813bp) protein (271aa)
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
ORF H1617 id=4267705 bin=GWC2_OP3-like_45_7 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_4
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(3359..4927)
DNA (1569bp) protein (523aa)
N-6 DNA methylase; K03427 type I restriction enzyme M protein [EC:2.1.1.72] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Type I restriction-modification system, DNA-methyltransferase subunit M (EC:2.1.1.72)
Type I restriction-modification system DNA methylase id=1899225 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_5
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

5032..7269
DNA (2238bp) protein (746aa)
hypothetical protein n=2 Tax=Marinimicrobia RepID=UPI00039C935B
smc; SMC family chromosome segregation protein; K03529 chromosome segregation protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
smc; SMC family chromosome segregation protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_6
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

7386..10106
DNA (2721bp) protein (907aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI0003719B38
5'-nucleotidase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
5'-nucleotidase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_7
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(10161..11357)
DNA (1197bp) protein (399aa)
methionine adenosyltransferase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=5 Tax=Clostridium thermocellum RepID=METK_CLOTH
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_8
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

11487..11909
DNA (423bp) protein (141aa)
peptidase M15A Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
id=2012755 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_9
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

11906..12802
DNA (897bp) protein (299aa)
hypothetical protein n=2 Tax=unclassified candidate division OP9 RepID=UPI000364FAD7
XerD; site-specific recombinase XerD; K03733 integrase/recombinase XerC Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
xerC_2; tyrosine recombinase XerC
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_10
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

12912..13355
DNA (444bp) protein (148aa)
hypothetical protein; K07040 uncharacterized protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Putative uncharacterized protein id=4397701 bin=GWF2_OP9-related_38_17 species=Clostridium carboxidivorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_11
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists


13360..13566
DNA (207bp) protein (69aa)
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
50S ribosomal protein L32 id=4841626 bin=GWC2_Deltaproteobacteria_55_46 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
rpmF; 50S ribosomal protein L32
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_12
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

13567..14559
DNA (993bp) protein (331aa)
putative glycerol-3-phosphate acyltransferase PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Phosphate acyltransferase n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W579_DESAS
putative glycerol-3-phosphate acyltransferase PlsX
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_13
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

14556..15518
DNA (963bp) protein (321aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TRU1_ALKMQ
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_14
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

15672..16829
DNA (1158bp) protein (386aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1) Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
acyl-CoA dehydrogenase, short-chain specific (EC:1.3.99.2) id=7201268 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
butyryl-CoA dehydrogenase (EC:1.3.8.1)
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_15
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(16858..17988)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64NA8_BACFR
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_16
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(18012..18950)
DNA (939bp) protein (313aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_17
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

19265..20047
DNA (783bp) protein (261aa)
electron transfer flavoprotein subunit beta n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B48F47
etfB; Electron transfer flavoprotein, beta subunit Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Electron transfer flavoprotein alpha/beta-subunit
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_18
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

20047..21261
DNA (1215bp) protein (405aa)
etfA; Electron transfer flavoprotein, alpha subunit Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Electron transfer flavoprotein alpha subunit id=2594056 bin=GWA2_Elusi_like_61_42 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
etfA; Electron transfer flavoprotein, alpha subunit
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_19
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(21258..22403)
DNA (1146bp) protein (382aa)
AAA+ superfamily protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
AAA+ superfamily protein id=4752495 bin=GWC2_Elusimicrobia_51_8 species=Mariniradius saccharolyticus genus=Mariniradius taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
AAA+ superfamily protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_20
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(22532..22750)
DNA (219bp) protein (73aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_21
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

22782..23156
DNA (375bp) protein (125aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_22
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

23478..24338
DNA (861bp) protein (287aa)
malonyl CoA-acyl carrier protein transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IUA8_9FIRM
malonyl CoA-acyl carrier protein transacylase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_23
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

24412..25143
DNA (732bp) protein (244aa)
fabG; 3-oxoacyl-(acyl-carrier-protein) reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
3-oxoacyl-(Acyl-carrier-protein) reductase id=4012360 bin=GWF2_OP3_43_52 species=Bacillus coagulans genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
fabG; 3-oxoacyl-(acyl-carrier-protein) reductase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_24
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

25254..25499
DNA (246bp) protein (82aa)
acpP; acyl carrier protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Acyl carrier protein id=4361760 bin=GWF2_OP9_related_35_9 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
acpP; acyl carrier protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_25
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

25503..26456
DNA (954bp) protein (318aa)
Putative uncharacterized protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AVV2_SYNWW
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_26
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

26453..27694
DNA (1242bp) protein (414aa)
3-oxoacyl-(acyl-carrier-protein) synthase 2 Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
3-oxoacyl-[acyl-carrier-protein] synthase 2 id=4397712 bin=GWF2_OP9-related_38_17 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
3-oxoacyl-(acyl-carrier-protein) synthase 2
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_27
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

27704..31924
DNA (4221bp) protein (1407aa)
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
id=24610595 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_28
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(31929..34208)
DNA (2280bp) protein (760aa)
Serine protease, subtilase family n=3 Tax=Geobacter metallireducens RepID=Q39XN3_GEOMG
peptidase S8/S53 subtilisin kexin sedolisin Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
subtilase family serine protease
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_29
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

34253..35446
DNA (1194bp) protein (398aa)
4-aminobutyrate aminotransferase (EC:2.6.1.19); K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
4-aminobutyrate aminotransferase (EC:2.6.1.19)
4-aminobutyrate aminotransferase n=1 Tax=Paenisporosarcina sp. TG-14 RepID=UPI00031DDCAA
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_128_30
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(35441..35737)
DNA (297bp) protein (99aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Displaying items 1-30 of 70 in total

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