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RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226

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Displaying items 1-30 of 56 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_1
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

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180..1226
DNA (1047bp) protein (349aa)
glyceraldehyde-3-phosphate dehydrogenase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Glyceraldehyde 3-phosphate dehydrogenase id=3790091 bin=GWF2_Lentisphaerae_49_21 species=Bodo saltans genus=Bodo taxon_order=Kinetoplastida taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
glyceraldehyde-3-phosphate dehydrogenase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_2
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

1242..2444
DNA (1203bp) protein (401aa)
phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Clostridium sp. CAG:356 RepID=R6YS90_9CLOT
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_3
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(2520..2708)
DNA (189bp) protein (63aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_4
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(2764..4395)
DNA (1632bp) protein (544aa)
phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (EC:5.4.2.1); K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GFB5_9FIRM
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_5
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

4482..4700
DNA (219bp) protein (73aa)
secG; preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Protein translocase, SecG subunit id=4082026 bin=GWF2_OP9_related_35_9 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
secG; preprotein translocase subunit SecG
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_6
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

4716..5336
DNA (621bp) protein (207aa)
TM helix repeat-containing protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
TM helix repeat-containing protein id=14625551 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Latescibacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_7
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

5384..5893
DNA (510bp) protein (170aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_8
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

6107..6586
DNA (480bp) protein (160aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_9
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

6693..7613
DNA (921bp) protein (307aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13); K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Bacillus clausii (strain KSM-K16) RepID=MRAY_BACSK
phospho-N-acetylmuramoyl-pentapeptide-transferase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_10
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

7640..8971
DNA (1332bp) protein (444aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase; K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU53_9FIRM
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_11
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

8953..10050
DNA (1098bp) protein (366aa)
stage V sporulation protein E; K03588 cell division protein FtsW Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Stage V sporulation protein E id=1774363 bin=GWD2_RBX1-related_39_127 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
stage V sporulation protein E
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_12
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

10052..11104
DNA (1053bp) protein (351aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QVM7_ACEAZ
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_13
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

11097..12518
DNA (1422bp) protein (474aa)
murC; UDP-N-acetyl-muramate:alanine ligase, L-alanine adding enzyme (EC:6.3.2.8) Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
murC; UDP-N-acetyl-muramate:alanine ligase, L-alanine adding enzyme (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase id=4117116 bin=GWF2_OP9-related_38_17 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_14
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

12515..13357
DNA (843bp) protein (281aa)
murB; UDP-N-acetylenolpyruvoylglucosamine reductase; K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
UDP-N-acetylenolpyruvoylglucosamine reductase 2 n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=MURB2_SYMTH
murB; UDP-N-acetylenolpyruvoylglucosamine reductase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_15
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

13384..14238
DNA (855bp) protein (285aa)
transketolase, N-terminal subunit; K00615 transketolase [EC:2.2.1.1] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Transketolase, N-terminal subunit n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5CYI8_PELTS
transketolase, N-terminal subunit
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_16
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

14235..15185
DNA (951bp) protein (317aa)
transketolase; K00615 transketolase [EC:2.2.1.1] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Transketolase central region n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8VY31_DESAS
transketolase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_17
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

15182..15628
DNA (447bp) protein (149aa)
dCMP deaminase (EC:3.5.4.12); K01493 dCMP deaminase [EC:3.5.4.12] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
dCMP deaminase (EC:3.5.4.12)
deaminase n=1 Tax=Succinispira mobilis RepID=UPI00037D3795
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_18
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

15669..15974
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Sporolactobacillus laevolacticus DSM 442 RepID=V6J0J8_9BACL
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_19
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

15993..16853
DNA (861bp) protein (287aa)
prephenate dehydratase (EC:4.2.1.51); K04518 prephenate dehydratase [EC:4.2.1.51] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Prephenate dehydratase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBZ6_ANADF
prephenate dehydratase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_20
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

16896..17126
DNA (231bp) protein (77aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_21
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

17130..17438
DNA (309bp) protein (103aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_22
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

17438..17617
DNA (180bp) protein (60aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_23
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists


17723..19276
DNA (1554bp) protein (518aa)
argS; arginyl-tRNA synthetase; K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Arginine--tRNA ligase n=1 Tax=Phascolarctobacterium sp. CAG:266 RepID=R6IB53_9FIRM
argS; arginyl-tRNA synthetase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_24
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

19338..20612
DNA (1275bp) protein (425aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_25
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

20682..21155
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KIK0_9FIRM
plasmid-related protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_26
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

21180..22091
DNA (912bp) protein (304aa)
branched-chain amino acid aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Branched-chain amino acid aminotransferase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDV7_THET1
branched-chain amino acid aminotransferase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_27
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

22093..22449
DNA (357bp) protein (119aa)
acpS; 4'-phosphopantetheinyl transferase; K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Holo-[acyl-carrier-protein] synthase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=ACPS_SYMTH
acpS; 4'-phosphopantetheinyl transferase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_28
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

22508..23356
DNA (849bp) protein (283aa)
yjeF-like protein, hydroxyethylthiazole kinase-related protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
ADP-dependent (S)-NAD(P)H-hydrate dehydratase id=4113517 bin=GWF2_OP3_43_52 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
yjeF-like protein, hydroxyethylthiazole kinase-related protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_29
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

23334..24113
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) RepID=B1XLS4_SYNP2
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_226_30
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

24183..24920
DNA (738bp) protein (246aa)
ABC-type transport system involved in resistance to organic solvents, ATPase component Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
ABC transporter related protein id=2127655 bin=GWD2_RBX1-related_39_127 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
ABC-type transport system involved in resistance to organic solvents, ATPase component
Displaying items 1-30 of 56 in total

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