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RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252

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Displaying items 1-30 of 58 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_1
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

295..1854
DNA (1560bp) protein (520aa)
alpha-isopropylmalate/homocitrate synthase family transferase; K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
2-isopropylmalate synthase/homocitrate synthase family protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YK61_THEYD
alpha-isopropylmalate/homocitrate synthase family transferase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_2
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

1996..3261
DNA (1266bp) protein (422aa)
diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Diaminopimelate decarboxylase id=1733676 bin=GWD2_RBX1-related_39_127 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
diaminopimelate decarboxylase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_3
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

3277..4098
DNA (822bp) protein (274aa)
Hypothetical protein YbbP, contains nucleotide-binding domain of DisA bacterial checkpoint controller Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Uncharacterized protein id=1733664 bin=GWD2_RBX1-related_39_127 species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Hypothetical protein YbbP, contains nucleotide-binding domain of DisA bacterial checkpoint controller
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_4
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

4086..4844
DNA (759bp) protein (253aa)
ketopantoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
ketopantoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IE49_9FIRM
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_5
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

4884..5471
DNA (588bp) protein (196aa)
aroK; shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=AROK_THEYD
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_6
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

5533..6645
DNA (1113bp) protein (371aa)
3-dehydroquinate synthase n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K5E9_HALHC
3-dehydroquinate synthase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
3-dehydroquinate synthase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_7
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

6646..7821
DNA (1176bp) protein (392aa)
tyrS; tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Tyrosine--tRNA ligase n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=SYY_PELCD
tyrS; tyrosyl-tRNA ligase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_8
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

7818..8687
DNA (870bp) protein (290aa)
spsK; Spore coat polysaccharide biosynthesis protein spsK Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Spore coat polysaccharide biosynthesis protein spsK id=2284564 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
spsK; Spore coat polysaccharide biosynthesis protein spsK
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_9
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

8684..9769
DNA (1086bp) protein (362aa)
Glycosyl transferase group 1 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TL78_9CHLR
group 1 glycosyl transferase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
group 1 glycosyl transferase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_10
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

9773..10756
DNA (984bp) protein (328aa)
GDP-mannose 4,6-dehydratase (EC:4.2.1.47) Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
GDP-mannose 4,6-dehydratase n=3 Tax=unclassified Alphaproteobacteria (miscellaneous) RepID=UPI0003796665
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_11
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

10756..13359
DNA (2604bp) protein (868aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVJ3_9BACT
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_12
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

13383..14777
DNA (1395bp) protein (465aa)
UDP-phosphate glucose phosphotransferase (EC:2.7.8.-) Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
UDP-phosphate glucose phosphotransferase (EC:2.7.8.-)
Undecaprenyl-phosphate glucose phosphotransferase n=1 Tax=uncultured bacterium RepID=K2B271_9BACT
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_13
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

14799..15392
DNA (594bp) protein (198aa)
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Putative uncharacterized protein id=4853131 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_14
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

15434..15913
DNA (480bp) protein (160aa)
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12); K01770 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Clostridium difficile CD160 RepID=T3DRT2_CLODI
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_15
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

15910..16674
DNA (765bp) protein (255aa)
pdxJ; pyridoxine 5'-phosphate synthase; K03474 pyridoxine 5-phosphate synthase [EC:2.6.99.2] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Pyridoxine 5'-phosphate synthase n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=PDXJ_SYNJB
pdxJ; pyridoxine 5'-phosphate synthase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_16
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

16671..17102
DNA (432bp) protein (144aa)
rpiB; ribose-5-phosphate isomerase B (EC:5.3.1.6); K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
rpiB; ribose-5-phosphate isomerase B (EC:5.3.1.6)
Ribose-5-phosphate isomerase B n=1 Tax=Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01) RepID=I0GIH6_CALEA
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_17
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

17099..18208
DNA (1110bp) protein (370aa)
nucleotidyl transferase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]; K01840 phosphomannomutase [EC:5.4.2.8] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Nucleotidyl transferase id=4834345 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
nucleotidyl transferase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_18
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

18292..18642
DNA (351bp) protein (117aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_19
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

18639..18845
DNA (207bp) protein (69aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_20
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

18845..20191
DNA (1347bp) protein (449aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_21
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

20255..24928
DNA (4674bp) protein (1558aa)
hypothetical protein n=1 Tax=Anaerococcus sp. PH9 RepID=UPI000301D308
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_22
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

24959..25243
DNA (285bp) protein (95aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_23
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

25273..25491
DNA (219bp) protein (73aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_24
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

25555..25872
DNA (318bp) protein (106aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_25
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

25886..26785
DNA (900bp) protein (300aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_26
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

26803..26961
DNA (159bp) protein (53aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_27
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

26970..27590
DNA (621bp) protein (207aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_28
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

27597..28001
DNA (405bp) protein (135aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_29
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

28013..29626
DNA (1614bp) protein (538aa)
id=24610419 Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
id=24610419 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_252_30
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

29695..32787
DNA (3093bp) protein (1031aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Displaying items 1-30 of 58 in total

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