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RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 996 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_1
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(3..614)
DNA (612bp) protein (204aa)
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_2
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(569..1471)
DNA (903bp) protein (301aa)
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_3
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

1698..2135
DNA (438bp) protein (146aa)
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_4
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

2137..2625
DNA (489bp) protein (163aa)
Response regulator receiver Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Response regulator receiver id=4022108 bin=GWF2_OP9_related_35_9 species=Gloeocapsa sp. PCC 73106 genus=Gloeocapsa taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_5
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

2698..3270
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Pseudomonas pyrrocinia RepID=UPI0002D711F1
A-factor biosynthesis repeat-containing protein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
A-factor biosynthesis repeat-containing protein
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_6
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

3219..3896
DNA (678bp) protein (226aa)
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_7
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

3887..6001
DNA (2115bp) protein (705aa)
Sensor protein (EC:2.7.13.3) Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Two-component sensor kinase id=4022107 bin=GWF2_OP9_related_35_9 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
signal transduction histidine kinase
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_8
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

6038..18121
DNA (12084bp) protein (4028aa)
Peptidase M23 n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZWU4_MAHA5
peptidase M23 Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
peptidase M23
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_9
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

18090..19016
DNA (927bp) protein (309aa)
hypothetical protein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Uncharacterized protein id=4407283 bin=GWF2_OP9-related_38_17 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
hypothetical protein
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_10
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

19069..20421
DNA (1353bp) protein (451aa)
pyruvate carboxyltransferase Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Pyruvate carboxyltransferase id=4948342 bin=GWC2_Nitrospirae_57_13 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
pyruvate carboxyltransferase
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_11
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

20421..21506
DNA (1086bp) protein (362aa)
isocitrate/isopropylmalate dehydrogenase Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Isocitrate dehydrogenase id=4704271 bin=GWC2_Planctomycetes_45_44 species=Blastopirellula marina genus=Blastopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
isocitrate/isopropylmalate dehydrogenase
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_12
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

21499..22407
DNA (909bp) protein (303aa)
malate dehydrogenase; K00024 malate dehydrogenase [EC:1.1.1.37] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Malate dehydrogenase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E951_METEZ
malate dehydrogenase
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_13
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

22617..22907
DNA (291bp) protein (97aa)
10 kDa chaperonin n=1 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V8P4_THELD
chaperonin Cpn10; K04078 chaperonin GroES Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
chaperonin Cpn10
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_14
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

22924..24588
DNA (1665bp) protein (555aa)
60 kDa chaperonin; K04077 chaperonin GroEL Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
UPI00020A9C1C related cluster id=2095232 bin=GWE2_RBX1_39_32 species=Thermodesulfobium narugense genus=Thermodesulfobium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
60 kDa chaperonin
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_15
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

24704..26746
DNA (2043bp) protein (681aa)
phosphoenolpyruvate-protein phosphotransferase; K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Gallibacterium anatis 12656/12 RepID=U1I6U3_9PAST
phosphoenolpyruvate-protein phosphotransferase
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_16
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(26723..28063)
DNA (1341bp) protein (447aa)
D-lactate dehydrogenase; K00102 D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
FAD/FMN-containing dehydrogenase id=3873917 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
D-lactate dehydrogenase
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_17
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

28206..29195
DNA (990bp) protein (330aa)
nusA; transcription elongation factor NusA; K02600 N utilization substance protein A Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
NusA antitermination factor id=1893590 bin=GWD2_RBX1-related_39_127 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
nusA; transcription elongation factor NusA
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_18
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

29161..31182
DNA (2022bp) protein (674aa)
Translation initiation factor IF-2 n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CNN8_DESK7
translation initiation factor IF-2; K02519 translation initiation factor IF-2 Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
translation initiation factor IF-2
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_19
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

31175..31585
DNA (411bp) protein (137aa)
Ribosome-binding factor A n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=RBFA_SYMTH
ribosome-binding factor A; K02834 ribosome-binding factor A Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
ribosome-binding factor A
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_20
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

31539..32486
DNA (948bp) protein (316aa)
Phosphoesterase RecJ domain protein n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S3L4_THEOJ
phosphoesterase RecJ domain-containing protein; K06881 phosphoesterase RecJ domain-containing protein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
phosphoesterase RecJ domain-containing protein
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_21
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

32486..33172
DNA (687bp) protein (229aa)
tRNA pseudouridine synthase B (EC:4.2.1.70); K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
tRNA pseudouridine synthase B (EC:4.2.1.70)
tRNA pseudouridine synthase B n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2BE0A
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_22
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

33165..35147
DNA (1983bp) protein (661aa)
NAD-dependent DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
NAD-dependent DNA ligase (EC:6.5.1.2)
DNA ligase n=1 Tax=Thermincola potens (strain JR) RepID=D5XD69_THEPJ
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_23
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(35436..36881)
DNA (1446bp) protein (482aa)
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9); K01810 glucose-6-phosphate isomerase [EC:5.3.1.9] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=G6PI_SYMTH
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_24
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(36937..38565)
DNA (1629bp) protein (543aa)
phosphoglucomutase; K01835 phosphoglucomutase [EC:5.4.2.2] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Phosphoglucomutase n=1 Tax=delta proteobacterium NaphS2 RepID=D8EZI4_9DELT
phosphoglucomutase
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_25
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(38663..39856)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LTK8_DESBD
hypothetical protein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
hypothetical protein
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_26
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

39948..40928
DNA (981bp) protein (327aa)
6-phosphofructokinase; K00850 6-phosphofructokinase [EC:2.7.1.11] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=9 Tax=Thermoanaerobacter RepID=K6PF_THEP3
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_27
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

40969..42384
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7UUU3_DESML
Uncharacterized protein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_28
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

42372..43367
DNA (996bp) protein (332aa)
Radical SAM domain protein n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DG33_CLOTH
radical SAM family protein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
radical SAM family protein
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_29
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(43361..44569)
DNA (1209bp) protein (403aa)
6-phosphofructokinase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A2Q2_MELRP
phosphofructokinase Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
phosphofructokinase
RIFOXYB2_FULL_CP_46_45_rifoxyb2_full_scaffold_0_30
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(44574..45548)
DNA (975bp) protein (325aa)
fructose-bisphosphate aldolase (EC:4.1.2.13); K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase id=2078213 bin=GWD2_RBX1-related_39_127 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Displaying items 1-30 of 996 in total

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