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rifoxyb2_full_scaffold_3673_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyb2_full_scaffold_3673_curated_1
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..163)
DNA (162bp) protein (54aa)
Protein TolB id=1882201 bin=GWB2_Deltaproteobacteria_65_81 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_3673_curated_2
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160..1029)
DNA (870bp) protein (290aa)
TolA protein id=1882202 bin=GWB2_Deltaproteobacteria_65_81 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good + rbh
hypothetical protein; K03646 colicin import membrane protein
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_3673_curated_3
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1031..1453)
DNA (423bp) protein (141aa)
TolR protein id=4709462 bin=GWC2_Deltaproteobacteria_66_88 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
tolR protein; K03560 biopolymer transport protein TolR
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_3673_curated_4
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1458..2210)
DNA (753bp) protein (251aa)
TolQ1 id=4918941 bin=GWA2_Deltaproteo_65_63 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria rbh
tolQ1; protein TolQ1; K03562 biopolymer transport protein TolQ
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_3673_curated_5
RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2341..2739
DNA (399bp) protein (133aa)
Transcriptional regulator, Fur family protein id=4709464 bin=GWC2_Deltaproteobacteria_66_88 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
ferric uptake regulator, Fur family; K09825 Fur family transcriptional regulator, peroxide stress response regulator
Tax=RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated
rifoxyb2_full_scaffold_3673_curated_6
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2827..4191)
DNA (1365bp) protein (455aa)
gltA; type I citrate synthase; K01647 citrate synthase [EC:2.3.3.1] rbh
Citrate synthase id=1882209 bin=GWB2_Deltaproteobacteria_65_81 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good + rbh
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_3673_curated_7
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4454..5161)
DNA (708bp) protein (236aa)
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_3673_curated_8
unknown

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comp(5246..5338)
DNA (93bp) protein (31aa)

This feature has no annotations

rifoxyb2_full_scaffold_3673_curated_9
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5589..7604
DNA (2016bp) protein (672aa)
methionine synthase (EC:2.1.1.13); K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] rbh
Methionine synthase id=1882212 bin=GWB2_Deltaproteobacteria_65_81 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good + rbh
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
Displaying 9 items

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