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rifoxyb2_full_scaffold_13304_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyb2_full_scaffold_13304_curated_1
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3..248
DNA (246bp) protein (82aa)
Putative transmembrane anti-sigma factor id=2274811 bin=GWB2_Deltaproteobacteria_65_81 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_13304_curated_2
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(262..1161)
DNA (900bp) protein (300aa)
Ribosomal protein L32 id=4584113 bin=GWC2_Proteo_65_14_Ab886 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria rbh
hypothetical protein
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_13304_curated_3
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1198..1671
DNA (474bp) protein (158aa)
acyl-CoA hydrolase; K01076 [EC:3.1.2.-] id=24558784 bin=RBG_19FT_COMBO_GAL15_69_19 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Acyl-CoA thioester hydrolase (EC:3.1.2.-)
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_13304_curated_4
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1693..3201)
DNA (1509bp) protein (503aa)
SufS subfamily cysteine desulfurase; K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] id=24558786 bin=RBG_19FT_COMBO_GAL15_69_19 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate rbh
sufS; cysteine desulfurase (EC:2.8.1.7) rbh
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_13304_curated_5
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3344..3865)
DNA (522bp) protein (174aa)
Iron-regulated ABC transporter permease protein SufD id=1718153 bin=GWB2_Deltaproteobacteria_65_81 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
FeS assembly protein SufD; K09015 Fe-S cluster assembly protein SufD
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_13304_curated_6
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4046..4741
DNA (696bp) protein (232aa)
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_13304_curated_7
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4594..5385)
DNA (792bp) protein (264aa)
FeS assembly ATPase SufC id=3715823 bin=GWC2_Deltaproteobacteria_66_88 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria rbh
sufC; FeS assembly ATPase SufC; K09013 Fe-S cluster assembly ATP-binding protein rbh
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_13304_curated_8
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5382..6875)
DNA (1494bp) protein (498aa)
Iron-regulated ABC transporter membrane component SufB id=3715821 bin=GWC2_Deltaproteobacteria_66_88 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria rbh
sufB; FeS assembly protein SufB; K09014 Fe-S cluster assembly protein SufB rbh
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_13304_curated_9
RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7046..7243
DNA (198bp) protein (66aa)
hypothetical protein id=2274805 bin=GWB2_Deltaproteobacteria_65_81 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated
Displaying 9 items

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