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rifoxyb2_full_scaffold_3887_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyb2_full_scaffold_3887_curated_1
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1..738
DNA (738bp) protein (246aa)
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-); K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
ATP-dependent DNA helicase RecG id=4430761 bin=GWA2_Deltaproteo_65_63 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_3887_curated_2
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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830..1144
DNA (315bp) protein (105aa)
id=14623731 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_3887_curated_3
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1170..1349)
DNA (180bp) protein (60aa)
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_3887_curated_4
RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1463..2659
DNA (1197bp) protein (399aa)
PLP-dependent aminotransferase, putative aspartate aminotransferase (EC:2.6.1.- 2.6.1.1) rbh
Putative PLP-dependent aminotransferase, putative aspartate aminotransferase id=1814823 bin=GWB2_Deltaproteobacteria_65_81 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good + rbh
Tax=RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated
rifoxyb2_full_scaffold_3887_curated_5
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3466..3975
DNA (510bp) protein (170aa)
homoserine dehydrogenase; K00003 homoserine dehydrogenase [EC:1.1.1.3]
Homoserine dehydrogenase id=1814819 bin=GWB2_Deltaproteobacteria_65_81 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good + rbh
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_3887_curated_6
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3991..5046
DNA (1056bp) protein (352aa)
L-threonine synthase (EC:4.2.3.1) rbh
L-threonine synthase id=1814816 bin=GWB2_Deltaproteobacteria_65_81 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good + rbh
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_3887_curated_7
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5058..6263
DNA (1206bp) protein (402aa)
cofactor-independent phosphoglycerate mutase; K15635 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] rbh
Proposed homoserine kinase id=4430756 bin=GWA2_Deltaproteo_65_63 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria rbh
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
rifoxyb2_full_scaffold_3887_curated_8
RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6275..6694
DNA (420bp) protein (140aa)
4-hydroxybenzoyl-CoA thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
Thioesterase family protein id=1814807 bin=GWB2_Deltaproteobacteria_65_81 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated
rifoxyb2_full_scaffold_3887_curated_9
RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6697..7287
DNA (591bp) protein (197aa)
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11); K02446 fructose-1,6-bisphosphatase II [EC:3.1.3.11]
Fructose-1,6-bisphosphatase id=4430754 bin=GWA2_Deltaproteo_65_63 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria rbh
Tax=RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated
Displaying 9 items

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