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rifoxyc1_full_scaffold_1925

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyc1_full_scaffold_1925_1
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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comp(1..225)
DNA (225bp) protein (75aa)
30S ribosomal protein S7P; K02992 small subunit ribosomal protein S7 Tax=RBG_16_Pacearchaeota_35_8_curated
rifoxyc1_full_scaffold_1925_2
unknown

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comp(227..418)
DNA (192bp) protein (64aa)

This feature has no annotations

rifoxyc1_full_scaffold_1925_3
CG_Pacearch_05, Pacearchaeota, Archaea

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comp(415..549)
DNA (135bp) protein (45aa)
30S ribosomal protein S12 n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RS12_METKA id=5103768 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=CG_Pacearch_05
30S ribosomal protein S12
rifoxyc1_full_scaffold_1925_4
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(798..1217)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374B7B8
NusA family KH domain-containing protein; K02600 N utilization substance protein A Tax=RBG_16_Pacearchaeota_35_8_curated
rifoxyc1_full_scaffold_1925_5
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(1269..4757)
DNA (3489bp) protein (1163aa)
rpoA1; DNA-directed RNA polymerase subunit A' (EC:2.7.7.6); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] Tax=RBG_13_Pacearchaeota_33_26_curated
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=5044121 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase
rifoxyc1_full_scaffold_1925_6
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(4763..8014)
DNA (3252bp) protein (1084aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6) Tax=RBG_16_Pacearchaeota_35_8_curated
DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
DNA-directed RNA polymerase n=2 Tax=Pyrococcus furiosus RepID=I6UQX5_9EURY
rifoxyc1_full_scaffold_1925_7

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comp(8014..8220)
DNA (207bp) protein (69aa)
DNA-directed RNA polymerase subunit H {ECO:0000313|EMBL:KHO50831.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KHO50831.1};; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
DNA-directed RNA polymerase subunit H n=11 Tax=Haloferax RepID=D4GZX3_HALVD
rifoxyc1_full_scaffold_1925_8
unknown

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comp(8553..9191)
DNA (639bp) protein (213aa)

This feature has no annotations

rifoxyc1_full_scaffold_1925_9
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(9261..9581)
DNA (321bp) protein (107aa)
Thioredoxin n=1 Tax=Clostridium sp. CAG:91 RepID=R6VQR3_9CLOT
trx; thioredoxin; K03671 thioredoxin 1 Tax=RBG_13_Pacearchaeota_33_26_curated
thioredoxin
rifoxyc1_full_scaffold_1925_10
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

Not on your lists

comp(9619..10665)
DNA (1047bp) protein (349aa)
CMP/dCMP deaminase zinc-binding protein; K01493 dCMP deaminase [EC:3.5.4.12] Tax=GWE2_Bacteroidetes_29_8_curated
CMP/dCMP deaminase zinc-binding protein id=3801596 bin=GWF2_Bacteroidetes_43_63 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
hypothetical protein
rifoxyc1_full_scaffold_1925_11
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(10714..11337)
DNA (624bp) protein (208aa)
dihydrofolate reductase (EC:1.5.1.3); K00287 dihydrofolate reductase [EC:1.5.1.3] Tax=CG_Pacearch_03
tmk; thymidylate kinase (EC:2.7.4.9)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00036B8D80
rifoxyc1_full_scaffold_1925_12
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(11334..12506)
DNA (1173bp) protein (391aa)
thymidylate synthase (FAD) (EC:2.1.1.148)
Thymidylate synthase n=1 Tax=Clostridium sp. CAG:470 RepID=R7FIK4_9CLOT
Thymidylate synthase Tax=CG_Pacearch_01
Displaying 12 items

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