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rifoxyc1_full_scaffold_4401

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyc1_full_scaffold_4401_1

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comp(1..414)
DNA (414bp) protein (138aa)
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF id=5048448 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
preprotein translocase subunit SecF
rifoxyc1_full_scaffold_4401_2

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comp(441..755)
DNA (315bp) protein (105aa)
Protein-export membrane protein SecF
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF id=5045761 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifoxyc1_full_scaffold_4401_3
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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1142..1423
DNA (282bp) protein (94aa)
Tax=RBG_13_Pacearchaeota_33_26_curated
rifoxyc1_full_scaffold_4401_4
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(1415..2137)
DNA (723bp) protein (241aa)
DNA-directed RNA polymerase subunit D (EC:2.7.7.6); K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=RBG_13_Pacearchaeota_33_26_curated
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003621DCB
DNA-directed RNA polymerase subunit D
rifoxyc1_full_scaffold_4401_5
AR13, Pacearchaeaota, DPANN, Archaea

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comp(2172..2660)
DNA (489bp) protein (163aa)
40S ribosomal protein S14 n=1 Tax=Guillardia theta RepID=Q98S22_GUITH
30S ribosomal protein S11 Tax=AR13
rps11p; 30S ribosomal protein S11
rifoxyc1_full_scaffold_4401_6
CG_Pacearch_01, Pacearchaeota, Archaea

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comp(2653..3162)
DNA (510bp) protein (170aa)
30S ribosomal protein S4 n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VS30_9EURY
rps4p; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=CG_Pacearch_01
30S ribosomal protein S4
rifoxyc1_full_scaffold_4401_7
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(3165..3620)
DNA (456bp) protein (152aa)
30S ribosomal protein S13 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS13_NANEQ id=5103690 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rps13p; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RBG_13_Pacearchaeota_33_26_curated
30S ribosomal protein S13
rifoxyc1_full_scaffold_4401_8
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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comp(3634..4176)
DNA (543bp) protein (181aa)
DNA-binding protein n=3 Tax=Pyrococcus RepID=Q8TZW3_PYRFU id=5103692 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein; K07572 putative nucleotide binding protein Tax=RBG_16_Pacearchaeota_35_8_curated
DNA-binding protein
rifoxyc1_full_scaffold_4401_9

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comp(4182..4487)
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E07C5
Uncharacterized protein {ECO:0000313|EMBL:KHO51449.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
rifoxyc1_full_scaffold_4401_10

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comp(4488..4751)
DNA (264bp) protein (88aa)
50S ribosomal protein L21e n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LLE8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KHO51448.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
50S ribosomal protein L21e
rifoxyc1_full_scaffold_4401_11

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comp(4792..4989)
DNA (198bp) protein (66aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51447.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
rifoxyc1_full_scaffold_4401_12

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comp(5060..6268)
DNA (1209bp) protein (403aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO49496.1}; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
hypothetical protein; K02004 putative ABC transport system permease protein id=5046030 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifoxyc1_full_scaffold_4401_13
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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comp(6273..7151)
DNA (879bp) protein (293aa)
hypothetical protein
id=5103794 Tax=RBG_16_Pacearchaeota_35_8_curated
id=5103794 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifoxyc1_full_scaffold_4401_14
unknown

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comp(7148..7504)
DNA (357bp) protein (119aa)

This feature has no annotations

Displaying 14 items

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