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RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14

Search features with annotation key words

Displaying items 1-30 of 392 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_1
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(3..719)
DNA (717bp) protein (239aa)
penicillin-binding protein 2 (EC:2.4.1.129)
Peptidoglycan glycosyltransferase n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0JY36_9FIRM
mrdA; penicillin-binding protein 2 MrdA Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_2
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(709..1176)
DNA (468bp) protein (156aa)
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_3
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(1173..1964)
DNA (792bp) protein (264aa)
rod shape-determining protein MreC; K03570 rod shape-determining protein MreC Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Cell shape-determining protein MreC id=2158944 bin=GWE2_Clostridiales_32_10 species=Clostridium sp. ASF356 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Clostridiales_32_10 organism_group=Clostridiales
mreC; cell shape-determining protein MreC
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_4
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(1966..3009)
DNA (1044bp) protein (348aa)
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Rod shape-determining protein MreB id=1858276 bin=GWD2_RBX1-related_39_127 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
rod shape-determining protein MreB
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_5
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(3023..3478)
DNA (456bp) protein (152aa)
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_6
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(3587..4276)
DNA (690bp) protein (230aa)
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_7
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(4273..5631)
DNA (1359bp) protein (453aa)
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_8
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(5642..5968)
DNA (327bp) protein (109aa)
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_9
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(5993..11410)
DNA (5418bp) protein (1806aa)
ATPase AAA-2 n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AY82_RUBXD
ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
ATPase
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_10
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(11403..12161)
DNA (759bp) protein (253aa)
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_11
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(12163..12924)
DNA (762bp) protein (254aa)
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_12
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(13028..14524)
DNA (1497bp) protein (499aa)
purA; adenylosuccinate synthase (EC:6.3.4.4)
Adenylosuccinate synthetase Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Adenylosuccinate synthetase id=1831734 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_13
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(14525..15439)
DNA (915bp) protein (305aa)
Pyruvate/Phosphoenolpyruvate kinase Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Pyruvate/Phosphoenolpyruvate kinase id=5800727 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_14
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(15436..16350)
DNA (915bp) protein (305aa)
Putative uncharacterized protein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Putative uncharacterized protein id=2150686 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_15
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(16370..17089)
DNA (720bp) protein (240aa)
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_16
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(17142..18263)
DNA (1122bp) protein (374aa)
FolC bifunctional protein; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
folylpolyglutamate synthetase; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] id=15192720 bin=GWC2_NOV_55_46 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
FolC bifunctional protein
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_17
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(18244..19104)
DNA (861bp) protein (287aa)
Tyrosine recombinase XerD n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTQ3_9FIRM
ripX; site-specific tyrosine recombinase for chromosome partitioning Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
ripX; site-specific tyrosine recombinase for chromosome partitioning
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_18
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(19085..19615)
DNA (531bp) protein (177aa)
NUDIX hydrolase; K01515 ADP-ribose pyrophosphatase [EC:3.6.1.13] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
NUDIX hydrolase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TR56_ALKMQ
NUDIX hydrolase
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_19
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(19597..20682)
DNA (1086bp) protein (362aa)
Peptidase T-like protein n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K860_HALHC
peptidase T-like protein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
peptidase T-like protein
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_20
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(20689..21633)
DNA (945bp) protein (315aa)
thiamine-monophosphate kinase (EC:2.7.4.16); K00946 thiamine-monophosphate kinase [EC:2.7.4.16] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase id=2455789 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_21
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(21663..22565)
DNA (903bp) protein (301aa)
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_22
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(22676..22783)
DNA (108bp) protein (36aa)
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_23
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(22780..24300)
DNA (1521bp) protein (507aa)
Sodium:neurotransmitter symporter family protein n=1 Tax=uncultured microorganism RepID=F8UHM0_9ZZZZ
SNF family Na+-dependent transporter Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
SNF family Na+-dependent transporter
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_24
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(24346..26256)
DNA (1911bp) protein (637aa)
AAA family ATPase, CDC48 subfamily n=1 Tax=Desulfurococcus mucosus (strain ATCC 35584 / DSM 2162 / JCM 9187 / O7/1) RepID=E8RA81_DESM0
AAA ATPase; K13525 transitional endoplasmic reticulum ATPase Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
AAA ATPase
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_25
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(26349..27374)
DNA (1026bp) protein (342aa)
filamentation induced by cAMP protein Fic Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
type IV pilus biogenesis protein PilC; K02653 type IV pilus assembly protein PilC id=15194526 bin=GWC2_NOV_55_46 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
filamentation induced by cAMP protein Fic
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_26
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(27408..28640)
DNA (1233bp) protein (411aa)
phosphomethylpyrimidine synthase n=1 Tax=Orenia marismortui RepID=UPI000374C62C
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
thiamine biosynthesis protein ThiC
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_27
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(28640..29161)
DNA (522bp) protein (174aa)
Rossmann fold nucleotide-binding protein-like protein; K06966 Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
hypothetical protein; K06966 id=1250732 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
hypothetical protein
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_28
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

29202..30413
DNA (1212bp) protein (404aa)
3-isopropylmalate dehydratase large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
3-isopropylmalate dehydratase large subunit n=1 Tax=Thermincola potens (strain JR) RepID=D5XAF1_THEPJ
3-isopropylmalate dehydratase large subunit
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_29
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

30523..31026
DNA (504bp) protein (168aa)
3-isopropylmalate dehydratase, small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
3-isopropylmalate dehydratase small subunit n=2 Tax=Caldicellulosiruptor RepID=E4S9H9_CALKI
3-isopropylmalate dehydratase, small subunit
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_14_30
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(30958..32136)
DNA (1179bp) protein (393aa)
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85); K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=2 Tax=Neisseria weaveri RepID=G2DK98_9NEIS
Displaying items 1-30 of 392 in total

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