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RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27

Search features with annotation key words

Displaying items 1-30 of 437 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_1
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(2..292)
DNA (291bp) protein (97aa)
short chain dehydrogenase Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_2
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(274..1251)
DNA (978bp) protein (326aa)
oxidoreductase domain-containing protein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Oxidoreductase, Gfo/Idh/MocA family id=4520645 bin=GWF2_Bacteroidetes_40_14 species=Polaribacter sp. MED152 genus=Polaribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
oxidoreductase protein
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_3
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(1255..2547)
DNA (1293bp) protein (431aa)
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8) Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase n=3 Tax=Legionella pneumophila RepID=R9SCQ2_LEGPN
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_4
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(2562..3734)
DNA (1173bp) protein (391aa)
Alcohol dehydrogenase (Fragment) n=1 Tax=uncultured bacterium RepID=K2BDU3_9BACT
iron-containing alcohol dehydrogenase Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
iron-containing alcohol dehydrogenase
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_5
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(3753..4451)
DNA (699bp) protein (233aa)
capsular polysaccharide biosynthesis homolog ywqC Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Lipopolysaccharide biosynthesis id=4894683 bin=GWC2_Nitrospirae-rel_56_14 species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
capsular polysaccharide biosynthesis protein
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_6
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(4496..4876)
DNA (381bp) protein (127aa)
S23 ribosomal protein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
S23 ribosomal id=4337 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
S23 ribosomal protein
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_7
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(4958..5302)
DNA (345bp) protein (115aa)
Nucleotidyltransferase n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YL90_THEYD
nucleotidyltransferase Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
nucleotidyltransferase
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_8
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(5299..5592)
DNA (294bp) protein (98aa)
Putative nucleotidyltransferase n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BL53_9EURY
putative nucleotidyltransferase Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
putative nucleotidyltransferase
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_9
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(5770..7941)
DNA (2172bp) protein (724aa)
polysaccharide export protein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Polysaccharide export protein id=2006183 bin=GWD2_Deltaproteobacteria_55_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
polysaccharide export protein
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_10
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(7941..8177)
DNA (237bp) protein (79aa)
alias=gwe2_scaffold_279_173 Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
alias=gwe2_scaffold_279_173 id=15189810 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_11
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(8198..9166)
DNA (969bp) protein (323aa)
hypothetical protein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Putative dehydrogenase id=2713159 bin=GWC2_CP_Nitrospirae-rel_42_7 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_12
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(9304..10446)
DNA (1143bp) protein (381aa)
methylthioribose-1-phosphate isomerase (EC:5.3.1.23); K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
methylthioribose-1-phosphate isomerase (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LW06_CLOCD
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_13
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(10772..11305)
DNA (534bp) protein (178aa)
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_14
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(11302..12648)
DNA (1347bp) protein (449aa)
UDP-N-acetylmuramyl tripeptide synthetase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Thermincola potens (strain JR) RepID=D5X9A6_THEPJ
UDP-N-acetylmuramyl tripeptide synthetase
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_15
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(12753..13766)
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI0003797456
methicillin resistance protein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
methicillin resistance protein
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_16
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

13812..14366
DNA (555bp) protein (185aa)
glutamine amidotransferase of anthranilate synthase; K01658 anthranilate synthase component II [EC:4.1.3.27] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Glutamine amidotransferase of anthranilate synthase n=1 Tax=Thermincola potens (strain JR) RepID=D5X788_THEPJ
glutamine amidotransferase of anthranilate synthase
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_17
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(14314..14586)
DNA (273bp) protein (91aa)
Regulatory protein, FmdB family n=1 Tax=Brachyspira pilosicoli P43/6/78 RepID=L0EX92_BRAPL
FmdB family regulatory protein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
regulatory protein, FmdB family
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_18
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(14573..15784)
DNA (1212bp) protein (404aa)
seryl-tRNA synthase (EC:6.1.1.11) Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
seryl-tRNA synthase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Geobacillus sp. JF8 RepID=S5YUU7_9BACI
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_19
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(15792..15998)
DNA (207bp) protein (69aa)
DUF2283 Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
DUF2283 id=35997 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_20
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(15995..16288)
DNA (294bp) protein (98aa)
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_21
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(16314..17729)
DNA (1416bp) protein (472aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase id=4044364 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_22
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

17779..19071
DNA (1293bp) protein (431aa)
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_23
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(19066..19557)
DNA (492bp) protein (164aa)
serine O-acetyltransferase (EC:2.3.1.30); K00640 serine O-acetyltransferase [EC:2.3.1.30] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=1 Tax=Thermodesulfobium narugense DSM 14796 RepID=M1E8B1_9FIRM
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_24
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

19648..20670
DNA (1023bp) protein (341aa)
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_25
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(20675..21202)
DNA (528bp) protein (176aa)
hypothetical protein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Putative uncharacterized protein id=2798735 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_26
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(21199..22191)
DNA (993bp) protein (331aa)
TrkA-N domain protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E534_GEOLS
TrkA-N domain-containing protein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
TrkA-N domain-containing protein
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_27
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(22204..22824)
DNA (621bp) protein (207aa)
Methyltransferase family protein n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4APG6_FLELS
methyltransferase family protein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
methyltransferase family protein
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_28
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(22814..23827)
DNA (1014bp) protein (338aa)
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11); K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase id=3947450 bin=GWF2_OP9_related_35_9 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_29
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(23879..24967)
DNA (1089bp) protein (363aa)
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_27_30
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(25017..28226)
DNA (3210bp) protein (1070aa)
glmU; bifunctional: N-acetyl glucosamine-1-phosphate uridyltransferase (N-terminal); glucosamine-1-phosphate acetyl transferase (C-terminal) (EC:2.7.7.23 2.3.1.57)
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AAA536-G10 RepID=UPI00037027F5
hypothetical protein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Displaying items 1-30 of 437 in total

View Taxonomy