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RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_1
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(1..1002)
DNA (1002bp) protein (334aa)
putative histidine kinase (EC:2.7.13.3) Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B5E93B
signal transduction histidine kinase
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_2
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(1269..1730)
DNA (462bp) protein (154aa)
TrmH family RNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Putative TrmH family tRNA-rRNA methyltransferase YacO protein n=1 Tax=Haloplasma contractile SSD-17B RepID=U2FHV2_9BACT
TrmH family RNA methyltransferase
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_3
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

1814..2119
DNA (306bp) protein (102aa)
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_4
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

2110..4062
DNA (1953bp) protein (651aa)
H(+)-transporting two-sector ATPase (EC:3.6.3.14); K02123 V-type H+-transporting ATPase subunit I [EC:3.6.3.14] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
H(+)-transporting two-sector ATPase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GGD1_9FIRM
V-type ATPase 116 kDa subunit
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_5
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

4053..4523
DNA (471bp) protein (157aa)
ntpK; V-type H-transportingATPase subunit K (EC:3.6.3.14); K02124 V-type H+-transporting ATPase subunit K [EC:3.6.3.14] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
ntpK; V-type H-transportingATPase subunit K (EC:3.6.3.14)
V-type H-transportingATPase subunit K n=5 Tax=Acidaminococcus RepID=G4Q792_ACIIR
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_6
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

4532..4885
DNA (354bp) protein (118aa)
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_7
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

4882..5652
DNA (771bp) protein (257aa)
V-type ATP synthase subunit C; K02119 V-type H+-transporting ATPase subunit C [EC:3.6.3.14] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
ATP synthase subunit n=4 Tax=Clostridium butyricum RepID=B1QU41_CLOBU
ATP synthase (C/AC39) subunit
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_8
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

5655..5975
DNA (321bp) protein (107aa)
V-type ATP synthase subunit F n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B64557
V-type ATP synthase subunit F Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_9
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

7028..7753
DNA (726bp) protein (242aa)
ATP synthase F0 subunit alpha (EC:3.6.3.14); K02117 V-type H+-transporting ATPase subunit A [EC:3.6.3.14] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI000374849D
ATP synthase subunit A
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_10
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

7750..9126
DNA (1377bp) protein (459aa)
H+transporting two-sector ATPase alpha/beta subunit; K02118 V-type H+-transporting ATPase subunit B [EC:3.6.3.14] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
V-type ATP synthase beta chain n=1 Tax=Caloramator fervidus RepID=Q2EQR5_9CLOT
H+transporting two-sector ATPase alpha/beta subunit
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_11
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

9107..9733
DNA (627bp) protein (209aa)
V-type ATP synthase subunit D n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SB31_9BACT
V-type ATP synthase subunit D Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
V-type ATP synthase subunit D
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_12
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(9693..10898)
DNA (1206bp) protein (402aa)
acetylornithine transaminase (EC:2.6.1.11); K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
4-aminobutyrate aminotransferase n=1 Tax=Bacillus endophyticus RepID=UPI0002D9AB6E
4-aminobutyrate aminotransferase
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_13
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

11010..13127
DNA (2118bp) protein (706aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0IEB9_9BACL
peptidase S8/S53 subtilisin kexin sedolisin Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
subtilase family serine protease
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_14
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(13124..17104)
DNA (3981bp) protein (1327aa)
hypothetical protein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
id=3524647 bin=GWF2_OP9_related_35_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
hypothetical protein
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_15
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(17101..18348)
DNA (1248bp) protein (416aa)
3-oxoacyl-(acyl carrier protein) synthase II; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Geobacillus sp. (strain WCH70) RepID=C5D778_GEOSW
3-oxoacyl-(acyl carrier protein) synthase II
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_16
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(18341..19312)
DNA (972bp) protein (324aa)
Putative uncharacterized protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AVV2_SYNWW
hypothetical protein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
hypothetical protein
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_17
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(19325..19567)
DNA (243bp) protein (81aa)
acpP; acyl carrier protein; K02078 acyl carrier protein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Acyl carrier protein id=4361760 bin=GWF2_OP9_related_35_9 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
acpP; acyl carrier protein
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_18
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(19586..20332)
DNA (747bp) protein (249aa)
3-oxoacyl-[acyl-carrier-protein] reductase ; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
3-oxoacyl-(Acyl-carrier-protein) reductase id=3030327 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
3-oxoacyl-[acyl-carrier-protein] reductase
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_19
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(20316..21173)
DNA (858bp) protein (286aa)
[Acyl-carrier-protein] S-malonyltransferase (EC:2.3.1.39); K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
[Acyl-carrier-protein] S-malonyltransferase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=7 Tax=Clostridium thermocellum RepID=A3DDZ0_CLOTH
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_20
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

21535..21741
DNA (207bp) protein (69aa)
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_21
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

21728..22138
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AZZ4_9BACT
Uncharacterized protein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_22
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

22199..23674
DNA (1476bp) protein (492aa)
homospermidine synthase (EC:2.5.1.44); K00808 homospermidine synthase [EC:2.5.1.44] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
homospermidine synthase (EC:2.5.1.44)
homospermidine synthase, partial n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B5765B
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_23
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

23671..24789
DNA (1119bp) protein (373aa)
Orn/DAP/Arg decarboxylase 2; K01581 ornithine decarboxylase [EC:4.1.1.17] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Orn/DAP/Arg decarboxylase 2; K01581 ornithine decarboxylase [EC:4.1.1.17] id=24609315 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=RAAC11 organism_group=Unknown_CP
Orn/DAP/Arg decarboxylase 2
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_24
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(24804..25355)
DNA (552bp) protein (184aa)
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_25
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(25453..26655)
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00037328E7
etfA; Electron transfer flavoprotein, alpha subunit Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
etfA; Electron transfer flavoprotein, alpha subunit
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_26
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(26655..27437)
DNA (783bp) protein (261aa)
etfB; Electron transfer flavoprotein, beta subunit Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Electron transfer flavoprotein beta-subunit id=4034266 bin=GWF2_Lentisphaerae_57_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Electron transfer flavoprotein alpha/beta-subunit
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_27
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(27441..28598)
DNA (1158bp) protein (386aa)
acyl-CoA dehydrogenase, short-chain specific (EC:1.3.99.2) Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Acyl-CoA dehydrogenase, short-chain specific id=4127508 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
acyl-CoA dehydrogenase, short-chain specific
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_28
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(28614..29549)
DNA (936bp) protein (312aa)
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HN89_9FIRM
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_29
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(29531..30481)
DNA (951bp) protein (317aa)
phosphate:acyl-(acyl carrier protein) acyltransferase; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Phosphate acyltransferase id=1922837 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
phosphate:acyl-(acyl carrier protein) acyltransferase
RIFOXYC2_FULL_CP_46_14_rifoxyc2_full_scaffold_351_30
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists


comp(30491..30694)
DNA (204bp) protein (68aa)
rpmF; ribosomal protein L32; K02911 large subunit ribosomal protein L32 Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
seg 6..18 id=41777 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
rpmF; 50S ribosomal protein L32
Displaying items 1-30 of 49 in total

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