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RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1531

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Displaying 20 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1531_1
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..933
DNA (933bp) protein (311aa)
phosphomannomutase ManB; K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y944_9BACT
manB-2; phosphomannomutase
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1531_2
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(957..1148)
DNA (192bp) protein (64aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1Y940_9DELT
O-antigen polymerase Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
O-antigen polymerase
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1531_3
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1190..1579)
DNA (390bp) protein (130aa)
Secreted protein n=1 Tax=sediment metagenome RepID=D9PH31_9ZZZZ
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1531_4
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1634..3862)
DNA (2229bp) protein (743aa)
isocitrate dehydrogenase, NADP-dependent (EC:1.1.1.42); K00031 isocitrate dehydrogenase [EC:1.1.1.42] Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
isocitrate dehydrogenase, NADP-dependent (EC:1.1.1.42)
Isocitrate dehydrogenase, NADP-dependent n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z308_DESAT
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1531_5
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4005..4400
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z1F4_DESAT
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1531_6
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4541..5854
DNA (1314bp) protein (438aa)
PAS/PAC sensor hybrid histidine kinase Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
Hamp domain/gaf domain/hd domain protein id=4250516 bin=GWF2_OP9_related_35_9 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
PAS/PAC sensor hybrid histidine kinase
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1531_7
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5918..6073
DNA (156bp) protein (52aa)
Rubredoxin n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RGR5_DESPD
rubredoxin-type Fe(Cys)4 protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
rubredoxin-type Fe(Cys)4 protein
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1531_8
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6202..6429
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NW78_9DELT
Uncharacterized protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1531_9
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6445..6651
DNA (207bp) protein (69aa)
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1531_10
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6678..7172
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI000381FA22
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1531_11
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7189..7338
DNA (150bp) protein (50aa)
adenine-specific DNA-methyltransferase; K03427 type I restriction enzyme M protein [EC:2.1.1.72] Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
Site-specific DNA-methyltransferase (Adenine-specific) n=1 Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SQL2_PLAL2
adenine-specific DNA-methyltransferase
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1531_12
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7372..8214
DNA (843bp) protein (281aa)
DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
ATP dependent DNA ligase id=4714174 bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
ATP-dependent DNA ligase
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1531_13
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8218..10032)
DNA (1815bp) protein (605aa)
membrane protease FtsH catalytic subunit (EC:3.4.24.-) Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
membrane protease FtsH catalytic subunit (EC:3.4.24.-) rbh
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CE42_DESTA
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1531_14
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10160..10303
DNA (144bp) protein (48aa)
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1531_15
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10287..11012
DNA (726bp) protein (242aa)
Competence protein F-like protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NTF2_9DELT
phosphoribosyltransferase Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
phosphoribosyltransferase
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1531_16
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11076..11177
DNA (102bp) protein (34aa)
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1531_17
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11259..12365
DNA (1107bp) protein (369aa)
translation initiation factor, aIF-2BI family (EC:5.3.1.23); K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23] Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
translation initiation factor, aIF-2BI family (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z554_DESAT
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1531_18
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12366..13481)
DNA (1116bp) protein (372aa)
Beta-lactamase n=1 Tax=uncultured bacterium RepID=K2CAK7_9BACT
beta-lactamase Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
beta-lactamase
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1531_19
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14077..15207
DNA (1131bp) protein (377aa)
DNA polymerase III, beta subunit (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z5P2_DESAT
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1531_20
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15262..16452
DNA (1191bp) protein (397aa)
DNA gyrase, B subunit (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
DNA gyrase, B subunit (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z5P1_DESAT
Displaying 20 items

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